RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 EVI2BP34910 448 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CDKN1AP38936 164 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 EIF1AXP47813 144 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 GAS1P54826 345 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CLDN20P56880 219 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CORO7P57737 925 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 MRPS35P82673 323 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 FAPQ12884 760 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 DLG1Q12959 904 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 STX5Q13190 355 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 LTB4RQ15722 352 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CT45A2Q5DJT8 189 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SGO1Q5FBB7 561 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 GTF2IRD2BQ6EKJ0 949 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 METTL2BQ6P1Q9 378 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 KLC3Q6P597 504 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 C3orf62Q6ZUJ4 267 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CYS1Q717R9 158 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CMC1Q7Z7K0 106 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 GTF2IRD2Q86UP8 949 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SLC44A2Q8IWA5 706 aaPredicted RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 SAMD14Q8IZD0 417 aaPredicted RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 METTL4Q8N3J2 472 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 OR2M3Q8NG83 312 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 OR5M1Q8NGP8 315 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 UHMK1Q8TAS1 419 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 RAB3IL1Q8TBN0 382 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 ZNF675Q8TD23 568 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 EFHD2Q96C19 240 aaPredicted RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 TM4SF18Q96CE8 201 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 NXNL1Q96CM4 212 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 ELOVL6Q9H5J4 265 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 NOL11Q9H8H0 719 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 LRTM1Q9HBL6 345 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SAYSD1Q9NPB0 183 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 GIMAP4Q9NUV9 329 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 FAIMQ9NVQ4 179 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 PAQR5Q9NXK6 330 aaPredicted RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 TAS2R9Q9NYW1 312 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SENP1Q9P0U3 644 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 WHRNQ9P202 907 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CPSF2Q9P2I0 782 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 MRTO4Q9UKD2 239 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 UTS2RQ9UKP6 389 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CLEC4AQ9UMR7 237 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SNX12Q9UMY4 172 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 ABCG2Q9UNQ0 655 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SLC12A4Q9UP95 1085 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 FAM159BA6NKW6 160 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 EIF1AYO14602 144 aaKnown RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 SS18L1O75177 396 aaPredicted RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 IGHV4-39P01824 125 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 GSTA2P09210 222 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 DANCRP0C864 163 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 IL32P24001 234 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 DSCR9P59020 149 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 TRA2BP62995 288 aaKnown RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 CALCOCO2Q13137 446 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 ACAP2Q15057 778 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 NRF1Q16656 503 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 CTU2Q2VPK5 515 aaKnown RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 ZNF628Q5EBL2 1059 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 SH2D4BQ5SQS7 431 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 NCMAPQ5T1S8 102 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 PDSS1Q5T2R2 415 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 C6orf52Q5T4I8 152 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 COMMD6Q7Z4G1 85 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 EXOC3L1Q86VI1 746 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 WDR75Q8IWA0 830 aaKnown RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 LRRC8AQ8IWT6 810 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 SLC35F6Q8N357 371 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 PPM1NQ8N819 430 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 OR52B6Q8NGF0 335 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 DUSP19Q8WTR2 217 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 RNF138Q8WVD3 245 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 KCTD4Q8WVF5 259 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 KAT2AQ92830 837 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 MTBPQ96DY7 904 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 C1GALT1C1Q96EU7 318 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 CNRIP1Q96F85 164 aaPredicted RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 VSTM2LQ96N03 204 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 C19orf24Q9BVV8 132 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 SHARPINQ9H0F6 387 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 FOLH1BQ9HBA9 442 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 ZBTB26Q9HCK0 441 aa8.04□□□□□ -1.12
VPS11-203ENST00000529545 MAGED1Q9Y5V3 778 aaPredicted RBP8.04□□□□□ -1.12
VPS11-203ENST00000529545 C17orf51A8MQB3 221 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 OR7A17O14581 309 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 EIF3HO15372 352 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS11-203ENST00000529545 SSX4O60224 188 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 GPRIN2O60269 458 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 SIX3O95343 332 aaPredicted RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 TUBBP07437 444 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 PABPC4LP0CB38 370 aaKnown RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 TCP1P17987 556 aaKnown RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 THBS2P35442 1172 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 SLC6A8P48029 635 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 NUDT6P53370 316 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 PSMD4P55036 377 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms