RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 G6PC3Q9BUM1 346 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 BTBD2Q9BX70 525 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 ACTRT3Q9BYD9 372 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 HHATLQ9HCP6 504 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 PNPLA3Q9NST1 481 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 SIRT3Q9NTG7 399 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-215ENST00000528396 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 TNFRSF10DQ9UBN6 386 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 USH1CQ9Y6N9 552 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 PCNX1Q96RV3 2341 aa12.22□□□□□ -0.45
CAPN1-215ENST00000528396 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 UBDO15205 165 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 SLC22A3O75751 556 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 SASH3O75995 380 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 ALDOCP09972 364 aaKnown RBP12.21□□□□□ -0.45
CAPN1-215ENST00000528396 ACP2P11117 423 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 CHI3L1P36222 383 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-215ENST00000528396 STX1BP61266 288 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 UFM1P61960 85 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 GSTA3Q16772 222 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 SPANXN4Q5MJ08 99 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 FNDC7Q5VTL7 733 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 CDC73Q6P1J9 531 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 GALNT10Q86SR1 603 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 YRDCQ86U90 279 aaKnown RBP12.21□□□□□ -0.45
CAPN1-215ENST00000528396 CLECL1Q8IZS7 167 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 ZNF808Q8N4W9 903 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-215ENST00000528396 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 GLB1L3Q8NCI6 653 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-215ENST00000528396 PSMA8Q8TAA3 256 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 GIMAP5Q96F15 307 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 MARK4Q96L34 752 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 STACQ99469 402 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 UBQLN3Q9H347 655 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 PTGES2Q9H7Z7 377 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
CAPN1-215ENST00000528396 DUXAA6NLW8 204 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 SCDO00767 359 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 WDR1O75083 606 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 KCNK2O95069 426 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 TGDSO95455 350 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 ACVR2AP27037 513 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 PTGDSP41222 190 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 LRRC74AQ0VAA2 488 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPN1-215ENST00000528396 GRAMD1BQ3KR37 738 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 EIPR1Q53HC9 387 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 WIPI1Q5MNZ9 446 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-215ENST00000528396 XKRXQ6PP77 449 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 B3GNT6Q6ZMB0 384 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 C6orf120Q7Z4R8 191 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 MARCH3Q86UD3 253 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 IFNEQ86WN2 208 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 PM20D2Q8IYS1 436 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 WDSUB1Q8N9V3 476 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 FAM83FQ8NEG4 500 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-215ENST00000528396 PHF10Q8WUB8 498 aaKnown RBP12.2□□□□□ -0.46
CAPN1-215ENST00000528396 CDS1Q92903 461 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 SLC35G5Q96KT7 338 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 MAGEB18Q96M61 343 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 OR52E6Q96RD3 313 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 PIGUQ9H490 435 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 TAS2R10Q9NYW0 307 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 CAMK2AQ9UQM7 478 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 SLC6A5Q9Y345 797 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 GPR45Q9Y5Y3 372 aa12.2□□□□□ -0.46
CAPN1-215ENST00000528396 UQCRHLA0A096LP55 91 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 C9JVG2 144 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 FAM47E-STBD1D6RA91 191 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 ANKRD28O15084 1053 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 FADS1O60427 444 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 PGRP06401 933 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 HOXD4P09016 255 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-215ENST00000528396 GABRA1P14867 456 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 MATN1P21941 496 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 UQCRC2P22695 453 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 TCEA1P23193 301 aaKnown RBP12.19□□□□□ -0.46
CAPN1-215ENST00000528396 DPP4P27487 766 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 LCN1P31025 176 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 SRD5A2P31213 254 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 DGKQP52824 942 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 AQP5P55064 265 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 RPS26P62854 115 aaKnown RBP12.19□□□□□ -0.46
CAPN1-215ENST00000528396 C17orf67Q0P5P2 114 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 PMPCAQ10713 525 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.19□□□□□ -0.46
CAPN1-215ENST00000528396 PDCD4Q53EL6 469 aaKnown RBP12.19□□□□□ -0.46
CAPN1-215ENST00000528396 CCNJQ5T5M9 372 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 C1orf185Q5T7R7 199 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 ATAD3BQ5T9A4 648 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 AAGABQ6PD74 315 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 EPGNQ6UW88 154 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 C16orf62Q7Z3J2 963 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 MAVSQ7Z434 540 aa12.19□□□□□ -0.46
CAPN1-215ENST00000528396 MIER2Q8N344 545 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms