RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 F3P13726 295 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 PVRP15151 417 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 DDX5P17844 614 aaKnown RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 TBXA2RP21731 343 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 SLC1A3P43003 542 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 SCN1BQ07699 218 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 ARHGAP19Q14CB8 494 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 PDGFRLQ15198 375 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 GLYR1Q49A26 553 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 FIGNL1Q6PIW4 674 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 GDF7Q7Z4P5 450 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 ZNF761Q86XN6 746 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 REM2Q8IYK8 340 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 SIRT6Q8N6T7 355 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 CCDC86Q9H6F5 360 aaKnown RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 NLKQ9UBE8 527 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 TBC1D29Q9UFV1 150 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 KIF26AQ9ULI4 1882 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
C11orf54-207ENST00000528288 NOX1Q9Y5S8 564 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 LTBP2Q14767 1821 aa6.97□□□□□ -1.29
C11orf54-207ENST00000528288 LOC102723532A0A0G2JNH3 316 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 EFCAB14O75071 495 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 CA3P07451 260 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 HNRNPA1P09651 372 aaKnown RBP eCLIP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 DRD2P14416 443 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 OMPP47874 163 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 SLC9A3P48764 834 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 HCCSP53701 268 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 RPS7P62081 194 aaKnown RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 RPE65Q16518 533 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 MAPK14Q16539 360 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PLK5Q496M5 336 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 KLHL22Q53GT1 634 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 Q5BKY6 102 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 TMEM240Q5SV17 173 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 DDI2Q5TDH0 399 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 SLC48A1Q6P1K1 146 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 MTFR2Q6P444 385 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 RPTNQ6XPR3 784 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 ASB18Q6ZVZ8 466 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 MTSS1LQ765P7 747 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 SYT9Q86SS6 491 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 ZNF513Q8N8E2 541 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 CYB561A3Q8NBI2 242 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PIGXQ8TBF5 258 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PATE1Q8WXA2 126 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 FGF11Q92914 225 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 SLC41A3Q96GZ6 507 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 SLC38A2Q96QD8 506 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 WACQ9BTA9 647 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PCBD2Q9H0N5 130 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 OR51V1Q9H2C8 321 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 HINT3Q9NQE9 182 aaKnown RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 C20orf141Q9NUB4 165 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 FBXL4Q9UKA2 621 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 MRPS2Q9Y399 296 aaKnown RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 ZNF780BQ9Y6R6 833 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 ARID1BQ8NFD5 2236 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 FAM25AB3EWG3 89 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 FAM25CB3EWG5 89 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 FAM25GB3EWG6 89 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 B4DXG7 233 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PEX12O00623 359 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 EMC8O43402 210 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PROM1O43490 865 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 MYL9P24844 172 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PKLRP30613 574 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 MPIP34949 423 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 SNRPD2P62316 118 aaKnown RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 TRAM2Q15035 370 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 BCL2A1Q16548 175 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 RAB42Q8N4Z0 105 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 OR2L5Q8NG80 312 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 NEIL3Q8TAT5 605 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 ENKURQ8TC29 256 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 GNPDA2Q8TDQ7 276 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 GRHL3Q8TE85 626 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 LCN9Q8WX39 176 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 DIO2Q92813 273 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 DEPDC7Q96QD5 511 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 TMEM246Q9BRR3 403 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 TEX101Q9BY14 249 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 HDAC8Q9BY41 377 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 RBCK1Q9BYM8 510 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 PHPT1Q9NRX4 125 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-207ENST00000528288 CES1P1Q9UKY3 287 aa6.96□□□□□ -1.29
C11orf54-207ENST00000528288 A0A0G2JPF8 293 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 LRRC72A6NJI9 287 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 CENPXA8MT69 81 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 HNRNPCL2B2RXH8 293 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 HNRNPCL3B7ZW38 293 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 POLR1CO15160 346 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 P2RX6O15547 441 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PRKNO60260 465 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 HNRNPCL4P0DMR1 293 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ENDOUP21128 410 aaKnown RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 IGFALSP35858 605 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms