RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 OR10A7Q8NGE5 316 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 OR5R1Q8NH85 324 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 DNAJB8Q8NHS0 232 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 RPLP0P6Q8NHW5 317 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TWIST2Q8WVJ9 160 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 C22orf15Q8WYQ4 148 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GCDHQ92947 438 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 HIST1H2ACQ93077 130 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 MOCOSQ96EN8 888 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 RRNAD1Q96FB5 475 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 ATXN7L3BQ96GX2 97 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ITCHQ96J02 903 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZNF583Q96ND8 569 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TAAR9Q96RI9 348 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 MTERF1Q99551 399 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 HSD17B14Q9BPX1 270 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZNF670Q9BS34 389 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TMED9Q9BVK6 235 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 AMNQ9BXJ7 453 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CHST5Q9GZS9 411 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TUBA4BQ9H853 241 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 BARX1Q9HBU1 254 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 MIEF1Q9NQG6 463 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 EXOSC3Q9NQT5 275 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 CLN6Q9NWW5 311 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TXNL4BQ9NX01 149 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 GPR83Q9NYM4 423 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CALML5Q9NZT1 146 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 PDP1Q9P0J1 537 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 UBQLN1Q9UMX0 589 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 EXO1Q9UQ84 846 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 SLC22A14Q9Y267 594 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GSTK1Q9Y2Q3 226 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 PPIL1Q9Y3C6 166 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 MSRB2Q9Y3D2 182 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 NPFFR2Q9Y5X5 522 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SHANK3Q9BYB0 1731 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZCWPW2A0A1B0GU75 182 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 A0A1B0GUH1 482 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR2M5A3KFT3 312 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR14I1A6ND48 311 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CXorf65A6NEN9 183 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TMEM200CA6NKL6 621 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GFYI3L273 518 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 AZIN1O14977 448 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PIP5K1BO14986 540 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 MBTPS2O43462 519 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR2T1O43869 369 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TSPAN2O60636 221 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 FZD7O75084 574 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 SOCS5O75159 536 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GGCTO75223 188 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 SEMA7AO75326 666 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ATP6AP2O75787 350 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ANXA9O76027 345 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR2A4O95047 310 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 RPP14O95059 124 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 DIRAS3O95661 229 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 B3GALT4O96024 378 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 F10P00742 488 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 IFNA17P01571 189 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PIGRP01833 764 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 VTNP04004 478 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PRR35P0CG20 571 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 C1GALT1C1LP0DN25 315 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PKMP14618 531 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 RPA2P15927 270 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 MGMTP16455 207 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ZNF25P17030 456 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 BMP7P18075 431 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 HNF1AP20823 631 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TACR3P29371 465 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 RBMS1P29558 406 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 BTCP35070 178 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 MAP3K8P41279 467 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 MC3RP41968 323 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CDKN1BP46527 198 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CDX1P47902 265 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 ZFP36L2P47974 494 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 PRKXP51817 358 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 SLC26A5P58743 744 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ZP1P60852 638 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 EIF5AP63241 154 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 MEF2AQ02078 507 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 SKP2Q13309 424 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CRHR2Q13324 411 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GAB1Q13480 694 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GTF2H3Q13889 308 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PTPRCAPQ14761 206 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 SF1Q15637 639 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 MPPED2Q15777 294 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 NDUFAF6Q330K2 333 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ATP6AP1LQ52LC2 224 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 XKR4Q5GH76 650 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PYY3Q5JQD4 70 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GCNT6Q5T4J0 391 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 C9orf64Q5T6V5 341 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 LIPKQ5VXJ0 399 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TDRD10Q5VZ19 366 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms