RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 AQP8O94778 261 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 FCGR2AP12318 317 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 CHN1P15882 459 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 HSD17B3P37058 310 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 NR1H2P55055 460 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 CSTF3Q12996 717 aaKnown RBP14.46□□□□□ -0.09
PTPRU-210ENST00000527027 STX5Q13190 355 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 SGCBQ16585 318 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 TCHHL1Q5QJ38 904 aaPredicted RBP14.46□□□□□ -0.09
PTPRU-210ENST00000527027 SH2D4BQ5SQS7 431 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 FAM219BQ5XKK7 198 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 SYT10Q6XYQ8 523 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 ZNF704Q6ZNC4 412 aaPredicted RBP14.46□□□□□ -0.09
PTPRU-210ENST00000527027 FAM9CQ8IZT9 166 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 ZNF611Q8N823 705 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 CDYL2Q8N8U2 506 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 C16orf78Q8WTQ4 265 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 BBS4Q96RK4 519 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 RTN4RQ9BZR6 473 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 FAM120CQ9NX05 1096 aaKnown RBP14.46□□□□□ -0.09
PTPRU-210ENST00000527027 NFU1Q9UMS0 254 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 EMC9Q9Y3B6 208 aa14.46□□□□□ -0.09
PTPRU-210ENST00000527027 SONP18583 2426 aaKnown RBP14.45□□□□□ -0.1
PTPRU-210ENST00000527027 A0A087WV62 115 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 A8MT66 165 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 COQ9O75208 318 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 ULK1O75385 1050 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 INHBAP08476 426 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 SBK3P0C264 359 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 CLK3P49761 638 aaKnown RBP14.45□□□□□ -0.1
PTPRU-210ENST00000527027 ATP5J2P56134 94 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 CLCQ05315 142 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 ZNF155Q12901 538 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-210ENST00000527027 TNK1Q13470 666 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 CAPRIN1Q14444 709 aaKnown RBP14.45□□□□□ -0.1
PTPRU-210ENST00000527027 RASA2Q15283 850 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 DECR1Q16698 335 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 STAC2Q6ZMT1 411 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 MARCH3Q86UD3 253 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 TMEM151AQ8N4L1 468 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 OR6K3Q8NGY3 331 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 METTL6Q8TCB7 284 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 PRRG4Q9BZD6 226 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 SHCBP1LQ9BZQ2 653 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 NINJ2Q9NZG7 142 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 FLRT3Q9NZU0 649 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 STOML1Q9UBI4 398 aa14.45□□□□□ -0.1
PTPRU-210ENST00000527027 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
PTPRU-210ENST00000527027 UQCRHLA0A096LP55 91 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 MYO1GB0I1T2 1018 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 HS3ST1O14792 307 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 PLAUP00749 431 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 IL11P20809 199 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 SERPINB9P50453 376 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 ACSM2AQ08AH3 577 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 C17orf67Q0P5P2 114 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 TMEM44Q2T9K0 475 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 SPIN4Q56A73 249 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 UBAP2Q5T6F2 1119 aaKnown RBP14.44□□□□□ -0.1
PTPRU-210ENST00000527027 ACSM2BQ68CK6 577 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 GALNT18Q6P9A2 607 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 PLPPR2Q96GM1 343 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 APIPQ96GX9 242 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 GMPPAQ96IJ6 420 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-210ENST00000527027 TMEM204Q9BSN7 226 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 FUT8Q9BYC5 575 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 ACPTQ9BZG2 426 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 FANCFQ9NPI8 374 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 ZDHHC18Q9NUE0 388 aa14.44□□□□□ -0.1
PTPRU-210ENST00000527027 MRTO4Q9UKD2 239 aaKnown RBP14.44□□□□□ -0.1
PTPRU-210ENST00000527027 C19orf53Q9UNZ5 99 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-210ENST00000527027 RAI1Q7Z5J4 1906 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-210ENST00000527027 ANK3Q12955 4377 aaKnown RBP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 IGLV3-32A0A0A0MS00 114 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 ESYT3A0FGR9 886 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 SUPT7LO94864 414 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 SLITRK5O94991 958 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 SOX30O94993 753 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 IL33O95760 270 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 PLGP00747 810 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 JUNP05412 331 aaKnown RBP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 NID1P14543 1247 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 HMOX2P30519 316 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 TIA1P31483 386 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 GSTM5P46439 218 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 EIF1AXP47813 144 aaKnown RBP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 SLC6A8P48029 635 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 CTBP2P56545 445 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 SLC7A5Q01650 507 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 KRTAP1-1Q07627 177 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 LGSNQ5TDP6 509 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 PPP4R4Q6NUP7 873 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 GGNQ86UU5 652 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 C11orf24Q96F05 449 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-210ENST00000527027 ZNF382Q96SR6 550 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 PAFAH2Q99487 392 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 Q9N2J8 555 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 CLEC4AQ9UMR7 237 aa14.43□□□□□ -0.1
PTPRU-210ENST00000527027 HEATR5AQ86XA9 2040 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms