RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 C1QL3Q5VWW1 255 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 METTL21CQ5VZV1 264 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 BICRALQ6AI39 1079 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 AAGABQ6PD74 315 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 DNAJC14Q6Y2X3 702 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRILQ7L0X0 811 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 C6orf120Q7Z4R8 191 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 PLCZ1Q86YW0 608 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SPPL2CQ8IUH8 684 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 PM20D2Q8IYS1 436 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF614Q8N883 585 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC16A11Q8NCK7 471 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR4N2Q8NGD1 307 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR52N2Q8NGI0 321 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SSC4DQ8WTU2 575 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 HOXB13Q92826 284 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SPDL1Q96EA4 605 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 NEURL3Q96EH8 262 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 OTUB1Q96FW1 271 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 C16orf58Q96GQ5 468 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TEX37Q96LM6 180 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR7D2Q96RA2 312 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 EBF4Q9BQW3 602 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM120AQ9BXJ8 343 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR51I1Q9H343 314 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TP63Q9H3D4 680 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCDC134Q9H6E4 229 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GALNT9Q9HCQ5 603 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ACKR4Q9NPB9 350 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SERHLQ9NQF3 203 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 UBQLN4Q9NRR5 601 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GPATCH2Q9NW75 528 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 THUMPD1Q9NXG2 353 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCDC167Q9P0B6 97 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 STOML1Q9UBI4 398 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ACAD8Q9UKU7 415 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 CORO2BQ9UQ03 480 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 LIPT1Q9Y234 373 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TLN1Q9Y490 2541 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 LOC400499M0QZD8 3231 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 C2orf72A6NCS6 295 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ALG1L2C9J202 215 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NPIPA2E9PIF3 369 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NPIPA3F8WFD2 350 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GTPBP1O00178 669 aaKnown RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCL21O00585 134 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 LRRTM2O43300 516 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 STX11O75558 287 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 OXSR1O95747 527 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ANGPTL1O95841 491 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NUDT14O95848 222 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ACTL6AO96019 429 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 IGHG3P01860 377 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 HPNP05981 417 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GSNP06396 782 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 HOXD4P09016 255 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZCCHC18P0CG32 403 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NR2F1P10589 423 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GABRA1P14867 456 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 TBXA2RP21731 343 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 DPP4P27487 766 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 MSX1P28360 303 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 PTPN6P29350 595 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 IL12AP29459 219 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 SRD5A2P31213 254 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 PTGER4P35408 488 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 DCTP40126 519 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 MAP3K8P41279 467 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CRATP43155 626 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF41P51814 821 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 DSCR4P56555 118 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 WNT3P56703 355 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 RPS26P62854 115 aaKnown RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 HSF1Q00613 529 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GRAMD1BQ3KR37 738 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GPAT3Q53EU6 434 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCNJQ5T5M9 372 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 RAET1LQ5VY80 246 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 SAXO2Q658L1 398 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM211Q6ICI0 200 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF585AQ6P3V2 769 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 TNFAIP8L2Q6P589 184 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 BLOC1S3Q6QNY0 202 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ENPP6Q6UWR7 440 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 RPTNQ6XPR3 784 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 Q6ZPB1 254 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CHMP1BQ7LBR1 199 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 MTERF4Q7Z6M4 381 aaKnown RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GALNT10Q86SR1 603 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CD163Q86VB7 1156 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 FJX1Q86VR8 437 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 IFNEQ86WN2 208 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 RNF130Q86XS8 419 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CLEC4FQ8N1N0 589 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMCO5AQ8N6Q1 288 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR5D16Q8NGK9 328 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR9I1Q8NGQ6 314 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GOT1L1Q8NHS2 421 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms