RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 ACVR1Q04771 509 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SLC10A7Q0GE19 358 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 DMC1Q14565 340 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF235Q14590 738 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF846Q147U1 533 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 GPNMBQ14956 572 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 CDK10Q15131 360 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZBED5Q49AG3 693 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 GTDC1Q4AE62 458 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 KRBOX4Q5JUW0 171 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SIRPB2Q5JXA9 342 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 PPM1LQ5SGD2 360 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 HECTD3Q5T447 861 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SDHAF4Q5VUM1 108 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 GARNL3Q5VVW2 1013 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 TPGS2Q68CL5 300 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SEL1L3Q68CR1 1132 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF470Q6ECI4 717 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM45BPQ6NSW5 357 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 FBXL22Q6P050 247 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 TMEM81Q6P7N7 255 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 EPGNQ6UW88 154 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 C9orf139Q6ZV77 190 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 CHST9Q7L1S5 443 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ANKRD33Q7Z3H0 272 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 PIWIL4Q7Z3Z4 852 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZER1Q7Z7L7 766 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 GPR180Q86V85 440 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF354CQ86Y25 554 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 LACC1Q8IV20 430 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 CPOQ8IVL8 374 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SLC22A9Q8IVM8 553 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 GPR65Q8IYL9 337 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 DSELQ8IZU8 1212 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 CENPLQ8N0S6 344 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 OR8H2Q8N162 312 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF441Q8N8Z8 693 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 LMNTD1Q8N9Z9 388 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 TDRD5Q8NAT2 981 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SCCPDHQ8NBX0 429 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ICA1LQ8NDH6 482 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 GOT1L1Q8NHS2 421 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 VANGL1Q8TAA9 524 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF461Q8TAF7 563 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM45AQ8TCE6 357 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 HM13Q8TCT9 377 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 MCOLN3Q8TDD5 553 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 LPGAT1Q92604 370 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 RND1Q92730 232 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 IGSF8Q969P0 613 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 PSMG2Q969U7 264 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ATP6V1E2Q96A05 226 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 RAB7BQ96AH8 199 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 RAD51AP1Q96B01 352 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 FBXL8Q96CD0 374 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 PABPC5Q96DU9 382 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ATXN7L3BQ96GX2 97 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 TMEM19Q96HH6 336 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ELMO2Q96JJ3 720 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 SORT1Q99523 831 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 DOK1Q99704 481 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 C19orf43Q9BQ61 176 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 MRPL57Q9BQC6 102 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 MGME1Q9BQP7 344 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 EBF4Q9BQW3 602 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZSCAN5AQ9BUG6 496 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 MFSD1Q9H3U5 465 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 NARFLQ9H6Q4 476 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 EVA1AQ9H8M9 152 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 PDFQ9HBH1 243 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 MAGEE1Q9HCI5 957 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 BPIFA1Q9NP55 256 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 INTS10Q9NVR2 710 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 TMEM9Q9P0T7 183 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ARMCX1Q9P291 453 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF624Q9P2J8 865 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 UXTQ9UBK9 157 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 MARCOQ9UEW3 520 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 DAPK2Q9UIK4 370 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 TINAGQ9UJW2 476 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 STOML2Q9UJZ1 356 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 RUVBL2Q9Y230 463 aaKnown RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 CAB39Q9Y376 341 aaPredicted RBP3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM96BQ9Y3D0 163 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 AP4S1Q9Y587 144 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 KIAA1549LQ6ZVL6 1849 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 BRCA2P51587 3418 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 PLXNA2O75051 1894 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 DENND4AQ7Z401 1863 aa3.11□□□□□ -1.91
LINCR-0001-203ENST00000524047 BPTFQ12830 3046 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 A0A0G2JPF8 293 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 TEX13CA0A0J9YWL9 993 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 A0A1B0GTQ1 180 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 CXorf51AA0A1B0GTR3 108 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 LOC390937A0A1W2PQ73 354 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 RGSL1A5PLK6 1076 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF840PA6NDX5 716 aa3.1□□□□□ -1.91
LINCR-0001-203ENST00000524047 MEI4A8MW99 385 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms