RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NOL11Q9H8H0 719 aaKnown RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 NMRAL1Q9HBL8 299 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 NGBQ9NPG2 151 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 AHSPQ9NZD4 102 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CES1P1Q9UKY3 287 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 MCTS1Q9ULC4 181 aaKnown RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 DYSFO75923 2080 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CADP27708 2225 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 LY6HO94772 140 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 CLDN9O95484 217 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 ADAP00813 363 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 FESP07332 822 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 TUBBP07437 444 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 IVDP26440 423 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 AGTR1P30556 359 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 CCNG1P51959 295 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 ARFIP1P53367 373 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 PNLIPRP2P54317 469 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 VLDLRP98155 873 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 GGTLC2Q14390 218 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 FAM120AOSQ5T036 256 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.36□□□□□ -0.75
SDCBP-211ENST00000523441 NUFIP2Q7Z417 695 aaKnown RBP10.36□□□□□ -0.75
SDCBP-211ENST00000523441 COMMD6Q7Z4G1 85 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 GALNT10Q86SR1 603 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 METTL25Q8N6Q8 603 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 BANPQ8N9N5 519 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 CDKL2Q92772 493 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 LRRC39Q96DD0 335 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 C1GALT1C1Q96EU7 318 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 UBXN10Q96LJ8 280 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 OSBPL9Q96SU4 736 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 HBEGFQ99075 208 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 GPR22Q99680 433 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 NPAS1Q99742 590 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 MCMBPQ9BTE3 642 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 TRIM2Q9C040 744 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 ZBTB26Q9HCK0 441 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 SDHAF3Q9NRP4 125 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 FARSBQ9NSD9 589 aaKnown RBP10.36□□□□□ -0.75
SDCBP-211ENST00000523441 POU2F3Q9UKI9 436 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 UTS2RQ9UKP6 389 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 PSME2Q9UL46 239 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 KCNS2Q9ULS6 477 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 AP4B1Q9Y6B7 739 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 SVEP1Q4LDE5 3571 aa10.36□□□□□ -0.75
SDCBP-211ENST00000523441 A0A096LNT2 108 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 LOC100289279A0A1B0GTE1 492 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 FOXE1O00358 373 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 ABCD4O14678 606 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 DLX3O60479 287 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 GUCY1B2O75343 617 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 LYZL6O75951 148 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 SEMA3DO95025 777 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 LTA4HP09960 611 aaKnown RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 CTAGE8P0CG41 777 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 COL6A2P12110 1019 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 PSMB1P20618 241 aaKnown RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 MRPS25P82663 173 aaKnown RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 IFT88Q13099 833 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 FRG1Q14331 258 aaKnown RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 RAB35Q15286 201 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 CARTPTQ16568 116 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 NRF1Q16656 503 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 ZNF628Q5EBL2 1059 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 LIPNQ5VXI9 398 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 HBMQ6B0K9 141 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 RPS27LQ71UM5 84 aaKnown RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 CTAGE4Q8IX94 777 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 PPM1NQ8N819 430 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 GATSQ8NAP1 163 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 CDC26Q8NHZ8 85 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 FAM168AQ92567 244 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 TM4SF18Q96CE8 201 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 MTBPQ96DY7 904 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 C11orf24Q96F05 449 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 BTBD9Q96Q07 612 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 CPNE1Q99829 537 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 LRRC1Q9BTT6 524 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 EML4Q9HC35 981 aaKnown RBP10.35□□□□□ -0.75
SDCBP-211ENST00000523441 SAYSD1Q9NPB0 183 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 FAIMQ9NVQ4 179 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 JRKLQ9Y4A0 524 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
SDCBP-211ENST00000523441 SYCE1LA8MT33 242 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 C9JVG2 144 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 OR7A17O14581 309 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 MTHFD2P13995 350 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 ADH6P28332 368 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 SFTPDP35247 375 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 GP5P40197 560 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 CLK3P49761 638 aaKnown RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 MRPS22P82650 360 aaKnown RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 DR1Q01658 176 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 LOXL1Q08397 574 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 GANABQ14697 944 aaKnown RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 ACAP2Q15057 778 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 ZKSCAN8Q15776 578 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms