RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 DNAJC9Q8WXX5 260 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 BTBD9Q96Q07 612 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 ZNF300Q96RE9 604 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 LMF1Q96S06 567 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 ZNF184Q99676 751 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 ARHGDIGQ99819 225 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 WDR77Q9BQA1 342 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 WFDC6Q9BQY6 131 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 ZPBPQ9BS86 351 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 NRSN2Q9GZP1 204 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 SAP130Q9H0E3 1048 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 NXF5Q9H1B4 397 aaKnown RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 VCXQ9H320 206 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 TRIM45Q9H8W5 580 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 REEP1Q9H902 201 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 WDR54Q9H977 334 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 LIN28AQ9H9Z2 209 aaKnown RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 CACYBPQ9HB71 228 aaKnown RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 Q9N2J8 555 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 THSD1Q9NS62 852 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 NDUFAF4Q9P032 175 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 C19orf25Q9UFG5 118 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 KCNE5Q9UJ90 142 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 ZNF223Q9UK11 482 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 SLC13A4Q9UKG4 626 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 CBLCQ9ULV8 474 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 CFL2Q9Y281 166 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 PADI2Q9Y2J8 665 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 GPR55Q9Y2T6 319 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 SAMHD1Q9Y3Z3 626 aaKnown RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 CHST2Q9Y4C5 530 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 TESMINQ9Y4I5 508 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 PCDHGA3Q9Y5H0 932 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 MAGED1Q9Y5V3 778 aaPredicted RBP6.22□□□□□ -1.41
PVT1-217ENST00000523190 ENPP4Q9Y6X5 453 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 U3KQV3 271 aa6.22□□□□□ -1.41
PVT1-217ENST00000523190 VCANP13611 3396 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 C2orf92A0A1B0GVN3 265 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 CDC14CA4D256 554 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 C7orf72A4D263 438 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 FRG2CA6NGY1 282 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 AGAP5A6NIR3 686 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 TTC36A6NLP5 189 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 OR6C76A6NM76 312 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 SYT5O00445 386 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 RAD1O60671 282 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 UGT2B17O75795 530 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 KLF7O75840 302 aaPredicted RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 SMNDC1O75940 238 aaKnown RBP eCLIP6.21□□□□□ -1.42
PVT1-217ENST00000523190 DNAJB5O75953 348 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 SOX30O94993 753 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 TNFSF15O95150 251 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 RASAL1O95294 804 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 LGI1O95970 557 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 DBIP07108 87 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 CYC1P08574 325 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 FPR1P21462 350 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 FUT4P22083 530 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 PRKAR1BP31321 381 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 DNAJA1P31689 397 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 PIGAP37287 484 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 DCTP40126 519 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 FOLR3P41439 243 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 PPICP45877 212 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 NOVA1P51513 510 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 GPR143P51810 404 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 NR0B1P51843 470 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 CDH12P55289 794 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 SLC26A5P58743 744 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 KCNC4Q03721 635 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 FOXD4Q12950 439 aaPredicted RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 DAG1Q14118 895 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 GANABQ14697 944 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 LAPTM4AQ15012 233 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 LARS2Q15031 903 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 PCOLCEQ15113 449 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 NPTX1Q15818 432 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 DECR1Q16698 335 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 KIF26BQ2KJY2 2108 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 C11orf91Q3C1V1 193 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 LIN52Q52LA3 116 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 OTUD3Q5T2D3 398 aaPredicted RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 PDZK1Q5T2W1 519 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 HLA-DQA1Q5Y7H0 255 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 ANKRD34AQ69YU3 496 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 PPP4R4Q6NUP7 873 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 PRR22Q8IZ63 422 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 CLIP4Q8N3C7 705 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 SVOPLQ8N434 492 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 ZNF614Q8N883 585 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 APCDD1LQ8NCL9 501 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 B3GNT7Q8NFL0 401 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 OR2Y1Q8NGV0 311 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 ADIPOR1Q96A54 375 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 EFHD2Q96C19 240 aaPredicted RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 SDCCAG3Q96C92 435 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 VMP1Q96GC9 406 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 LCORQ96JN0 433 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms