RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NFU1Q9UMS0 254 aa13.9□□□□□ -0.18
MRPS28-209ENST00000522987 FREM1Q5H8C1 2179 aa13.9□□□□□ -0.18
MRPS28-209ENST00000522987 NSD1Q96L73 2696 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-209ENST00000522987 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 COQ9O75208 318 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 AQP8O94778 261 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 GOSR1O95249 250 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 PYGBP11216 843 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 DDCP20711 480 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 UGT2B10P36537 528 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 PRKAA2P54646 552 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 MRPS22P82650 360 aaKnown RBP13.89□□□□□ -0.19
MRPS28-209ENST00000522987 ZNF763Q0D2J5 394 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 LCP2Q13094 533 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 OR2A2Q6IF42 318 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 ZNF551Q7Z340 670 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-209ENST00000522987 EXOC3L1Q86VI1 746 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 SAMD14Q8IZD0 417 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-209ENST00000522987 CEP112Q8N8E3 955 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 PIK3R3Q92569 461 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 ERP27Q96DN0 273 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 CCL19Q99731 98 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 NPAS1Q99742 590 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 TNFRSF12AQ9NP84 129 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 VDAC3Q9Y277 283 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 MRPS18CQ9Y3D5 142 aaKnown RBP13.89□□□□□ -0.19
MRPS28-209ENST00000522987 PTGDR2Q9Y5Y4 395 aa13.89□□□□□ -0.19
MRPS28-209ENST00000522987 USF3Q68DE3 2245 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 UQCRHLA0A096LP55 91 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 TRIM64A6NGJ6 449 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 TRIM64BA6NI03 449 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 UPK1AO00322 258 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 UTS2O95399 124 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 IGKV1D-16P01601 117 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
MRPS28-209ENST00000522987 PCSK6P29122 969 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 NTSP30990 170 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 GABRA3P34903 492 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 PKNOX1P55347 436 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 HSPB3Q12988 150 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 SGCBQ16585 318 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 DECR1Q16698 335 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 GRAMD1BQ3KR37 738 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 SHEQ5VZ18 495 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 FAM71E1Q6IPT2 247 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 ALKBH2Q6NS38 261 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 APOOLQ6UXV4 268 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 TIFABQ6ZNK6 161 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 SZRD1Q7Z422 152 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 L3HYPDHQ96EM0 354 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 C1GALT1C1Q96EU7 318 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 DTNBP1Q96EV8 351 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 OTUB1Q96FW1 271 aaPredicted RBP13.88□□□□□ -0.19
MRPS28-209ENST00000522987 EGLN2Q96KS0 407 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 TBL1XR1Q9BZK7 514 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 TSPYL1Q9H0U9 437 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
MRPS28-209ENST00000522987 C12orf65Q9H3J6 166 aaKnown RBP13.88□□□□□ -0.19
MRPS28-209ENST00000522987 SDHAF3Q9NRP4 125 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 C19orf53Q9UNZ5 99 aaPredicted RBP13.88□□□□□ -0.19
MRPS28-209ENST00000522987 TLN2Q9Y4G6 2542 aa13.88□□□□□ -0.19
MRPS28-209ENST00000522987 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 C16orf97H3BN30 126 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 EIF1AYO14602 144 aaKnown RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 ARHGEF9O43307 516 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 CRCPO75575 148 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 CGAP01215 116 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 EFNA1P20827 205 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 CRYGSP22914 178 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 EIF1AXP47813 144 aaKnown RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 SLC6A8P48029 635 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 RNF144AP50876 292 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 PRKAG1P54619 331 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 ACKR1Q16570 336 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 CYP27C1Q4G0S4 372 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 GALNT18Q6P9A2 607 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 YTHDF3Q7Z739 585 aaKnown RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 SLC22A9Q8IVM8 553 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 CIDECQ96AQ7 238 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 C11orf24Q96F05 449 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-209ENST00000522987 AMDHD1Q96NU7 426 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 KLHDC3Q9BQ90 382 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 PRRG4Q9BZD6 226 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 PTGES2Q9H7Z7 377 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 Q9N2J8 555 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 EMCNQ9ULC0 261 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 PROCRQ9UNN8 238 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 FIS1Q9Y3D6 152 aa13.87□□□□□ -0.19
MRPS28-209ENST00000522987 A0A087WV62 115 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 RIPK2O43353 540 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 EMC8O43402 210 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 AKAP10O43572 662 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 TNFRSF21O75509 655 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 IL33O95760 270 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 ANGPTL1O95841 491 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 CRHP06850 196 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 HEXAP06865 529 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms