RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 REXO5Q96IC2 774 aaKnown RBP10.98□□□□□ -0.65
PVT1-215ENST00000522963 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 SDF2Q99470 211 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 THTPAQ9BU02 230 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 SPATA9Q9BWV2 254 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 CADM1Q9BY67 442 aaKnown RBP10.98□□□□□ -0.65
PVT1-215ENST00000522963 ALG2Q9H553 416 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 THUMPD1Q9NXG2 353 aaKnown RBP10.98□□□□□ -0.65
PVT1-215ENST00000522963 P2RX2Q9UBL9 471 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 CD300AQ9UGN4 299 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 PRPF19Q9UMS4 504 aaKnown RBP10.98□□□□□ -0.65
PVT1-215ENST00000522963 YARS2Q9Y2Z4 477 aaKnown RBP10.98□□□□□ -0.65
PVT1-215ENST00000522963 PCDHGB3Q9Y5G1 929 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 NPFFR2Q9Y5X5 522 aa10.98□□□□□ -0.65
PVT1-215ENST00000522963 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.98□□□□□ -0.65
PVT1-215ENST00000522963 J3QKU1 62 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 TSPAN2O60636 221 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 DNAJC8O75937 253 aaPredicted RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 PDE5AO76074 875 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 SORBS2O94875 1100 aaKnown RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 OR6B1O95007 311 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 ZIC2O95409 532 aaPredicted RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 IL33O95760 270 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 AK1P00568 194 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 BCHEP06276 602 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 NR2F1P10589 423 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 HSD17B1P14061 328 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 PCGF2P35227 344 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 SOX3P41225 446 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 RFX3P48380 749 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 SSR4P51571 173 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 NRG3P56975 720 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 CDK6Q00534 326 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 RBBP4Q09028 425 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 SCARB2Q14108 478 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 ZNF169Q14929 603 aaPredicted RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 DECR1Q16698 335 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 VMACQ2NL98 169 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 GPAT3Q53EU6 434 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 SAMD4BQ5PRF9 694 aaKnown RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 ZNF468Q5VIY5 522 aaPredicted RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 DESI1Q6ICB0 168 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 IGFL2Q6UWQ7 119 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 Q6ZS92 163 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 MICU2Q8IYU8 434 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 SLC15A4Q8N697 577 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 Q8NA96 180 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 C11orf65Q8NCR3 313 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 FAM156AQ8NDB6 213 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 OR2T12Q8NG77 320 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 CPT1CQ8TCG5 803 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 EFHD2Q96C19 240 aaPredicted RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 TMEM19Q96HH6 336 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 TRNT1Q96Q11 434 aaKnown RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 KCTD14Q9BQ13 255 aaPredicted RBP10.97□□□□□ -0.65
PVT1-215ENST00000522963 RUBCNLQ9H714 662 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 LIPT1Q9Y234 373 aa10.97□□□□□ -0.65
PVT1-215ENST00000522963 ELOVL7A1L3X0 281 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 OR5H15A6NDH6 313 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 ERICH4A6NGS2 130 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 FCMRO60667 390 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 DNAJA2O60884 412 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 REM1O75628 298 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 PPM1BO75688 479 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 H6PDO95479 791 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 FBXO45P0C2W1 286 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 TCN1P20061 433 aaPredicted RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 MSX2P35548 267 aaPredicted RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 KRT20P35900 424 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 PGM1P36871 562 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 PSPHP78330 225 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 CHRNEQ04844 493 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 INPP5JQ15735 1006 aaPredicted RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.96□□□□□ -0.65
PVT1-215ENST00000522963 ZNF630Q2M218 657 aaPredicted RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 RPS26P11Q5JNZ5 115 aaPredicted RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 ERICH5Q6P6B1 374 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 PGM2L1Q6PCE3 622 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 FRRS1Q6ZNA5 592 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 LRRC74BQ6ZQY2 392 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 ARHGAP24Q8N264 748 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 METTL25Q8N6Q8 603 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 HIPK4Q8NE63 616 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 ASB15Q8WXK1 588 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 DIO2Q92813 273 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 HAS2Q92819 552 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 SPACA9Q96E40 222 aaPredicted RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 ADOQ96SZ5 270 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 UTP23Q9BRU9 249 aaKnown RBP10.96□□□□□ -0.65
PVT1-215ENST00000522963 ZNF350Q9GZX5 532 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 SLC38A1Q9H2H9 487 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 KLHL1Q9NR64 748 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 FLRT3Q9NZU0 649 aa10.96□□□□□ -0.65
PVT1-215ENST00000522963 CFAP46Q8IYW2 2715 aa10.95□□□□□ -0.66
PVT1-215ENST00000522963 NPIPA5A0A0B4J1W7 369 aa10.95□□□□□ -0.66
PVT1-215ENST00000522963 TRAV17A0A0B4J275 112 aa10.95□□□□□ -0.66
PVT1-215ENST00000522963 TMEM247A6NEH6 219 aa10.95□□□□□ -0.66
PVT1-215ENST00000522963 OR6C70A6NIJ9 312 aa10.95□□□□□ -0.66
PVT1-215ENST00000522963 C5orf58C9J3I9 102 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms