RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 KLHL42Q9P2K6 505 aa11.03□□□□□ -0.64
SYNPO-204ENST00000519664 TMEM5Q9Y2B1 443 aa11.03□□□□□ -0.64
SYNPO-204ENST00000519664 COL4A5P29400 1685 aa11.03□□□□□ -0.64
SYNPO-204ENST00000519664 WASHC1A8K0Z3 465 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 B8ZZF3 427 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF670-ZNF695F2Z2N8 137 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 BMP4P12644 408 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 HOXD11P31277 338 aaPredicted RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF81P51508 661 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 RPS15AP62244 130 aaKnown RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 ADARB1P78563 741 aaKnown RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 OC90Q02509 493 aaPredicted RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 CTU2Q2VPK5 515 aaKnown RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 PHF19Q5T6S3 580 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 WASH2PQ6VEQ5 465 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 SHISA6Q6ZSJ9 500 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 ASB12Q8WXK4 309 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 FATE1Q969F0 183 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 NXPE3Q969Y0 559 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 MOAP1Q96BY2 351 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 ACTL8Q9H568 366 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 SIAEQ9HAT2 523 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 CDH10Q9Y6N8 788 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 RREB1Q92766 1687 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 AGAP5A6NIR3 686 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 FURINP09958 794 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 RNH1P13489 461 aaKnown RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 GPX2P18283 190 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 TNFSF8P32971 234 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 MMP12P39900 470 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 MAZP56270 477 aaKnown RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 NRG3P56975 720 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 RPA4Q13156 261 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 LTB4RQ15722 352 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 ADPRMQ3LIE5 342 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 TP53I3Q53FA7 332 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 LRFN4Q6PJG9 635 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 TMEM179BQ7Z7N9 219 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 TMPRSS12Q86WS5 348 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 GID4Q8IVV7 300 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 PRR22Q8IZ63 422 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 METTL4Q8N3J2 472 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 DNAJC22Q8N4W6 341 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 CEP76Q8TAP6 659 aa11.02□□□□□ -0.64
SYNPO-204ENST00000519664 GAS2L1Q99501 681 aaPredicted RBP11.02□□□□□ -0.64
SYNPO-204ENST00000519664 RTTNQ86VV8 2226 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 FMO6PO60774 539 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 UPK1BO75841 260 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 THEGLP0DJG4 465 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 ARAFP10398 606 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 LIPAP38571 399 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 ISL1P61371 349 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 SNTB2Q13425 540 aaKnown RBP11.02□□□□□ -0.65
SYNPO-204ENST00000519664 GPR19Q15760 415 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 HSD17B12Q53GQ0 312 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 ENTHD1Q8IYW4 607 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 OR6Q1Q8NGQ2 317 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 CHFRQ96EP1 664 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 SLC6A13Q9NSD5 602 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 PLCL2Q9UPR0 1127 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 AHSA1O95433 338 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 IGFBP1P08833 259 aaPredicted RBP11.02□□□□□ -0.65
SYNPO-204ENST00000519664 TGFBR2P37173 567 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 LRRC37A5PQ49AS3 106 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 KLHL26Q53HC5 615 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 PAMR1Q6UXH9 720 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 SERPINA12Q8IW75 414 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 HCAR2Q8TDS4 363 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
SYNPO-204ENST00000519664 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.65
SYNPO-204ENST00000519664 MRPS17Q9Y2R5 130 aaKnown RBP11.02□□□□□ -0.65
SYNPO-204ENST00000519664 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 TRAV27A0A087WT01 109 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 KDM4BO94953 1096 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ITGAMP11215 1152 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 SMAD2Q15796 467 aaKnown RBP11.01□□□□□ -0.65
SYNPO-204ENST00000519664 C1orf94Q6P1W5 598 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 CNIH2Q6PI25 160 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 KIF18BQ86Y91 864 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 FAM109AQ8N4B1 249 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 MUL1Q969V5 352 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 S100A16Q96FQ6 103 aaKnown RBP11.01□□□□□ -0.65
SYNPO-204ENST00000519664 NKX2-4Q9H2Z4 354 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 MED20Q9H944 212 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 IFT46Q9NQC8 304 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 THSD1Q9NS62 852 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 GPR34Q9UPC5 381 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 GXYLT2A0PJZ3 443 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 TRAPPC13A5PLN9 417 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ETHE1O95571 254 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 MAS1P04201 325 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 GP1BBP13224 206 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 PGAM2P15259 253 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ZNF33BQ06732 778 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 LRRC26Q2I0M4 334 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 PARP16Q8N5Y8 322 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 RHOXF1Q8NHV9 184 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 CACNG6Q9BXT2 260 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms