RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 DNAJC13O75165 2243 aa13.31□□□□□ -0.28
TOP1MT-203ENST00000517857 FAM234BA2RU67 622 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 NPIPA2E9PIF3 369 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 NPIPA3F8WFD2 350 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 NR5A2O00482 541 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 CCL21O00585 134 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 ANP32DO95626 131 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 HPGDP15428 266 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 CA7P43166 264 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 CASP9P55211 416 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 SRSF1Q07955 248 aaKnown RBP eCLIP13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 LRRC74AQ0VAA2 488 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 GRAMD1BQ3KR37 738 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 DCST2Q5T1A1 773 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 FNDC7Q5VTL7 733 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 TRILQ7L0X0 811 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 FGD2Q7Z6J4 655 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 SSC4DQ8WTU2 575 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 DTNBP1Q96EV8 351 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 SIKE1Q9BRV8 207 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 INPP5KQ9BT40 448 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 G6PC3Q9BUM1 346 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 RMND5AQ9H871 391 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 SDHAF3Q9NRP4 125 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 FGFR1OP2Q9NVK5 253 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 DKKL1Q9UK85 242 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 ZNF835Q9Y2P0 537 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 PCDHGB3Q9Y5G1 929 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 POLEQ07864 2286 aa13.3□□□□□ -0.28
TOP1MT-203ENST00000517857 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 CCDC154A6NI56 674 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 RFXANKO14593 260 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 FADS1O60427 444 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 HCN1O60741 890 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 SOX30O94993 753 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 IGHG3P01860 377 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 GSNP06396 782 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 NCF2P19878 526 aaPredicted RBP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 PTPN6P29350 595 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 CDKN2CP42773 168 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 KHKP50053 298 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 SF3A3Q12874 501 aaKnown RBP eCLIP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 SQLEQ14534 574 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 EXOSC6Q5RKV6 272 aaKnown RBP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 C6orf10Q5SRN2 563 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 OR5M10Q6IEU7 315 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 TNFAIP8L2Q6P589 184 aaPredicted RBP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 ZNF621Q6ZSS3 439 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 C16orf62Q7Z3J2 963 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 PLCZ1Q86YW0 608 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 VPS33AQ96AX1 596 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 ITCHQ96J02 903 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 TMEM120AQ9BXJ8 343 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 OR51I1Q9H343 314 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 SERHL2Q9H4I8 314 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 GIN1Q9NXP7 522 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
TOP1MT-203ENST00000517857 CLEC18AA5D8T8 446 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 DUXAA6NLW8 204 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 C17orf51A8MQB3 221 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 SCDO00767 359 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 AQP7O14520 342 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 SUSD5O60279 629 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 CBR3O75828 277 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 OXSR1O95747 527 aaPredicted RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 TCEA1P23193 301 aaKnown RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 GCKP35557 465 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 MDH1P40925 334 aaKnown RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 ATP4BP51164 291 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 WIPI1Q5MNZ9 446 aaPredicted RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 ATAD3BQ5T9A4 648 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 SAXO2Q658L1 398 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 CLEC18BQ6UXF7 455 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 C3P1Q6ZMU1 363 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 MSANTD1Q6ZTZ1 278 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 ZAR1Q86SH2 424 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 YRDCQ86U90 279 aaKnown RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 MARCH3Q86UD3 253 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 CHERPQ8IWX8 916 aaKnown RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 EID3Q8N140 333 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 ZNF614Q8N883 585 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 WDSUB1Q8N9V3 476 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 GATSQ8NAP1 163 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 CLEC18CQ8NCF0 446 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 OR5M9Q8NGP3 310 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 OR14L1PQ8NHC6 308 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 GOT1L1Q8NHS2 421 aaPredicted RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 NEIL3Q8TAT5 605 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 FAM110BQ8TC76 370 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 PNPT1Q8TCS8 783 aaKnown RBP13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 RNF138Q8WVD3 245 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 STON2Q8WXE9 905 aa13.28□□□□□ -0.28
TOP1MT-203ENST00000517857 SARAFQ96BY9 339 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms