RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SERPINA11Q86U17 422 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 CYP4Z2PQ8N1L4 340 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 TMEM156Q8N614 296 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 OR5M3Q8NGP4 307 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 NFKBIDQ8NI38 313 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 SPPL2AQ8TCT8 520 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 GRHL3Q8TE85 626 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 PAQR8Q8TEZ7 354 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 SCMH1Q96GD3 660 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 TMEM19Q96HH6 336 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 COL21A1Q96P44 957 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 TRNT1Q96Q11 434 aaKnown RBP9.07□□□□□ -0.96
CLN8-202ENST00000517514 KLHDC3Q9BQ90 382 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 THUMPD3Q9BV44 507 aaKnown RBP9.07□□□□□ -0.96
CLN8-202ENST00000517514 QRSL1Q9H0R6 528 aaKnown RBP9.07□□□□□ -0.96
CLN8-202ENST00000517514 ADNPQ9H2P0 1102 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 RAD21L1Q9H4I0 556 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 BCL2L10Q9HD36 194 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 ZNF71Q9NQZ8 489 aaPredicted RBP9.07□□□□□ -0.96
CLN8-202ENST00000517514 LRFN1Q9P244 771 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 TEKT2Q9UIF3 430 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 TUBD1Q9UJT1 453 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 MKLN1Q9UL63 735 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 OR10H1Q9Y4A9 318 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 CHST2Q9Y4C5 530 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 PCDHGB7Q9Y5F8 929 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 FREM3P0C091 2139 aa9.07□□□□□ -0.96
CLN8-202ENST00000517514 CACNA1BQ00975 2339 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 PINLYPA6NC86 204 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 FAM220BPB1ANY3 271 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 OIP5O43482 229 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 KIAA0513O60268 411 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 BCAS1O75363 584 aaPredicted RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 PGM3O95394 542 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 OXSR1O95747 527 aaPredicted RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 EPPINO95925 133 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 AGR2O95994 175 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 AK1P00568 194 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 BCHEP06276 602 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 PCGF2P35227 344 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CASP3P42574 277 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 RFX3P48380 749 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CYB561P49447 251 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 RNF144AP50876 292 aaPredicted RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 NRG3P56975 720 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 NCALDP61601 193 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 PSPHP78330 225 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 LIPEQ05469 1076 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 LY6DQ14210 128 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 INPP5JQ15735 1006 aaPredicted RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 FXNQ16595 210 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 NADK2Q4G0N4 442 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 FNDC7Q5VTL7 733 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 IRAK1BP1Q5VVH5 260 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 TMEM81Q6P7N7 255 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 LRRC74BQ6ZQY2 392 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 RTL4Q6ZR62 310 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 Q6ZS92 163 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 NUP54Q7Z3B4 507 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 COMTD1Q86VU5 262 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 GPALPP1Q8IXQ4 340 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 DEFB107AQ8IZN7 70 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 RNF148Q8N7C7 305 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 GOLM1Q8NBJ4 401 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 POGLUT1Q8NBL1 392 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 FAM156AQ8NDB6 213 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 SLC39A7Q92504 469 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CLPTM1LQ96KA5 538 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CDRT15Q96T59 188 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 TREX2Q9BQ50 279 aaPredicted RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 UTP23Q9BRU9 249 aaKnown RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 C1orf21Q9H246 121 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
CLN8-202ENST00000517514 EXD2Q9NVH0 621 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 HPF1Q9NWY4 346 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 LHX6Q9UPM6 363 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CORO2BQ9UQ03 480 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 LIPT1Q9Y234 373 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 ZNF451Q9Y4E5 1061 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 PCDHGA10Q9Y5H3 936 aa9.06□□□□□ -0.96
CLN8-202ENST00000517514 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 C15orf38-AP3S2A0A0A6YYH1 394 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 C2orf72A6NCS6 295 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 CLDN24A6NM45 220 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 G3V3Y1 287 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 ERVH48-1M5A8F1 160 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SLC28A2O43868 658 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 NME2P1O60361 137 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 STX11O75558 287 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SLC25A12O75746 678 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 UGT2B17O75795 530 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 WISP2O76076 250 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SOX30O94993 753 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SP1P08047 785 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 NGFRP08138 427 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 NR2F1P10589 423 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 TBXA2RP21731 343 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 NME2P22392 152 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 IL12BP29460 328 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms