RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 BACE1P56817 501 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 STARD6P59095 220 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 RBM3P98179 157 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 MAT1AQ00266 395 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 GPR50Q13585 617 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 GUSBP1Q15486 140 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 LONRF1Q17RB8 773 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF470Q6ECI4 717 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 FRMPD2BQ6IN97 320 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 UFSP1Q6NVU6 142 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM92BQ6ZTR7 304 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEPT14Q6ZU15 432 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 GSTA5Q7RTV2 222 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRSS48Q7RTY5 328 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 RABEPKQ7Z6M1 372 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM156AQ8NDB6 213 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 B3GNT7Q8NFL0 401 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 NPBQ8NG41 125 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR52I1Q8NGK6 324 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 ACTL9Q8TC94 416 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 TRPC4APQ8TEL6 797 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 SECISBP2LQ93073 1101 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 GTF3C6Q969F1 213 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 KLHL15Q96M94 604 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 AIFM3Q96NN9 605 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 AMDHD1Q96NU7 426 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 CAMK2N2Q96S95 79 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 TBCBQ99426 244 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 NUP62CLQ9H1M0 184 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 PABPC3Q9H361 631 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRORYQ9H606 182 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 SLC25A22Q9H936 323 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 MTCH1Q9NZJ7 389 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 TRMT6Q9UJA5 497 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 DDX19BQ9UMR2 479 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 NYNRINQ9P2P1 1898 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 PKD1L1Q8TDX9 2849 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 IGHV5-51A0A0C4DH38 117 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 A0A1B0GVX0 72 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 FEZF1A0PJY2 475 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ERICH4A6NGS2 130 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 H0Y3Z8 333 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 PLOD3O60568 738 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 RHOBTB1O94844 696 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 URODP06132 367 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 PDGFRBP09619 1106 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 IRF2P14316 349 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 TBXA2RP21731 343 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 VDAC1P21796 283 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 IL12BP29460 328 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ADRA1AP35348 466 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 PIP4K2AP48426 406 aaPredicted RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 TMED10P49755 219 aaKnown RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 FOLH1Q04609 750 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF763Q0D2J5 394 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 RIPK1Q13546 671 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZIC1Q15915 447 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 AANATQ16613 207 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 LRRC37A5PQ49AS3 106 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEL1L2Q5TEA6 688 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ANO1Q5XXA6 986 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZFAND6Q6FIF0 208 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ENPP7Q6UWV6 458 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 KDM7AQ6ZMT4 941 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF620Q6ZNG0 422 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR1K1Q8NGR3 316 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 RFESDQ8TAC1 157 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 LINC01560Q8TB33 94 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 STYXQ8WUJ0 223 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR1E3Q8WZA6 343 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 PHYHIPQ92561 330 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 TSACCQ96A04 125 aaPredicted RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 C16orf58Q96GQ5 468 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM71F1Q96KD3 344 aaPredicted RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 C17orf62Q9BQA9 187 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 TTYH1Q9H313 450 aaPredicted RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 DSN1Q9H410 356 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 DNAJC18Q9H819 358 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 ANKZF1Q9H8Y5 726 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 RNF121Q9H920 327 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 SLCO1C1Q9NYB5 712 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 BTNL2Q9UIR0 455 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 INTS6Q9UL03 887 aaKnown RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 YARS2Q9Y2Z4 477 aaKnown RBP-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 PCDHGA5Q9Y5G8 931 aa-1.95□□□□□ -2.72
SNORA40.16-201ENST00000517238 EPG5Q9HCE0 2579 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 ADAMTS7Q9UKP4 1686 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 TDRD9Q8NDG6 1382 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR2A25A4D2G3 310 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 BTNL10A8MVZ5 291 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 IDSB3KWA1 339 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 PSMA7O14818 248 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 GCM2O75603 506 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 ANP32DO95626 131 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 CDS2O95674 445 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 FHP07954 510 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 ETS2P15036 469 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF7P17097 686 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 LGALS7P47929 136 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 SLC9A3P48764 834 aa-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms