RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	CPA3	P15088	417 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	HK1	P19367	917 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	TCEA1	P23193	301 aa	Known RBP	11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	CPOX	P36551	454 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	CLK3	P49761	638 aa	Known RBP	11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	EEFSEC	P57772	596 aa	Known RBP	11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	HSPB3	Q12988	150 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	STX5	Q13190	355 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	KIAA0040	Q15053	153 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	VPS26B	Q4G0F5	336 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	CLEC6A	Q6EIG7	209 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	PLXDC2	Q6UX71	529 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	P4HA3	Q7Z4N8	544 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	UBQLNL	Q8IYU4	475 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	HOXB13	Q92826	284 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	C1GALT1C1	Q96EU7	318 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	PIGQ	Q9BRB3	760 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	IQCG	Q9H095	443 aa	Known RBP	11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	DSN1	Q9H410	356 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	LRTM1	Q9HBL6	345 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	HHATL	Q9HCP6	504 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	C1orf109	Q9NX04	203 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	FLRT3	Q9NZU0	649 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF175	Q9Y473	711 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	TESMIN	Q9Y4I5	508 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	AKAP6	Q13023	2319 aa		11.14	□□□□□ -0.63
CDK18-223	ENST00000515514	SMIM23	A6NLE4	172 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514		A8MXE2	369 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	AZIN1	O14977	448 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	SEC22B	O75396	215 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	TNFRSF21	O75509	655 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	KCNH1	O95259	989 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	UTS2	O95399	124 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	CHEK2	O96017	543 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	FCGR2A	P12318	317 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	SDC1	P18827	310 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	KRT4	P19013	534 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	KLK2	P20151	261 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	FRK	P42685	505 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	PRR5	P85299	388 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	OCRL	Q01968	901 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	PDE7A	Q13946	482 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	KEAP1	Q14145	624 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	FGFBP1	Q14512	234 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	PCLAF	Q15004	111 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	DEFB113	Q30KQ7	82 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	GLYR1	Q49A26	553 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	METTL25	Q8N6Q8	603 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	EPS8L3	Q8TE67	593 aa	Known RBP	11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	PPCDC	Q96CD2	204 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	EGLN2	Q96KS0	407 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	MS4A4E	Q96PG1	132 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	TBL1XR1	Q9BZK7	514 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	RTN4R	Q9BZR6	473 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	PLEKHF2	Q9H8W4	249 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	EQTN	Q9NQ60	294 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	TMED5	Q9Y3A6	229 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	PTGDR2	Q9Y5Y4	395 aa		11.13	□□□□□ -0.63
CDK18-223	ENST00000515514	OR2M5	A3KFT3	312 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	SEC14L5	O43304	696 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	NKX2-2	O95096	273 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	NGFR	P08138	427 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	PRPS2	P11908	318 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF17	P17021	662 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	GPC1	P35052	558 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	MAP3K8	P41279	467 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	RFX3	P48380	749 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	RPL38	P63173	70 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	SLC18A2	Q05940	514 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	C17orf67	Q0P5P2	114 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	FOXD4	Q12950	439 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	TMEM44	Q2T9K0	475 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	KRTAP21-3	Q3LHN1	58 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	KANK2	Q63ZY3	851 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF551	Q7Z340	670 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	C4orf33	Q8N1A6	199 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	RIBC1	Q8N443	379 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	CNEP1R1	Q8N9A8	125 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	CDRT4	Q8N9R6	151 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	LRRN4CL	Q8ND94	238 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	OR2T11	Q8NH01	316 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	GFM2	Q969S9	779 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	APOPT1	Q96IL0	206 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	PINK1	Q9BXM7	581 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	REEP4	Q9H6H4	257 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	RNF122	Q9H9V4	155 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	MED11	Q9P086	117 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	NTM	Q9P121	344 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	NDRG3	Q9UGV2	375 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	AP4B1	Q9Y6B7	739 aa		11.12	□□□□□ -0.63
CDK18-223	ENST00000515514	GXYLT2	A0PJZ3	443 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ALG1L2	C9J202	215 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514		H3BML4	177 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	LSM1	O15116	133 aa	Known RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	EMC8	O43402	210 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms