RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 DPY30Q9C005 99 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 SERHLQ9NQF3 203 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 FAM215AQ9Y5M1 114 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 KCNK2O95069 426 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 UTS2O95399 124 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 HMGN2P05204 90 aaKnown RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 EFNA1P20827 205 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 HTR1EP28566 365 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 DCTP40126 519 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 KIR3DL1P43629 444 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 DSCR4P56555 118 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 HBA1P69905 142 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 POU6F2P78424 691 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 TOMM20Q15388 145 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 DUSP5Q16690 384 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 PGS1Q32NB8 556 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 C1orf185Q5T7R7 199 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 ANXA8L1Q5VT79 327 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 RTL6Q6ICC9 239 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 CDC73Q6P1J9 531 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 ZNF585AQ6P3V2 769 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 NCCRP1Q6ZVX7 275 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 WDR75Q8IWA0 830 aaKnown RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 GOLGA6L1Q8N7Z2 621 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 COX18Q8N8Q8 333 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 FADS6Q8N9I5 356 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 VPS37AQ8NEZ2 397 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 CA5BP1Q8WTZ4 195 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 PIK3R3Q92569 461 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 ZNF75CPQ92670 426 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 ABTB1Q969K4 478 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-210ENST00000515420 SDCCAG3Q96C92 435 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 C7orf26Q96N11 449 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 BTBD2Q9BX70 525 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 UGT2B28Q9BY64 529 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 ACTRT3Q9BYD9 372 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 PIGUQ9H490 435 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 CXorf36Q9H7Y0 433 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 AIG1Q9NVV5 245 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 PPP4R1LQ9P1A2 415 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 SNX8Q9Y5X2 465 aa11.63□□□□□ -0.55
CLCN3-210ENST00000515420 ADGRG4Q8IZF6 3080 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 IGLV3-32A0A0A0MS00 114 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 PRSS51A0A1B0GVH4 220 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 GXYLT2A0PJZ3 443 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 C2orf72A6NCS6 295 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 ALG1L2C9J202 215 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 E9PBE3 544 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 CFLARO15519 480 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 IGKV1D-16P01601 117 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
CLCN3-210ENST00000515420 CPN1P15169 458 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 BMP7P18075 431 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 TBXA2RP21731 343 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 CHMP24386 653 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 EPHA3P29320 983 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 GFRA1P56159 465 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 WNT3P56703 355 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 NUP107P57740 925 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 C17orf67Q0P5P2 114 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 LRRC74AQ0VAA2 488 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 PMPCAQ10713 525 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 TP53BP2Q13625 1128 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 LASP1Q14847 261 aaKnown RBP11.62□□□□□ -0.55
CLCN3-210ENST00000515420 SPDYE7PQ495Y7 208 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 EIPR1Q53HC9 387 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 TTMPQ5BVD1 217 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 WIPI1Q5MNZ9 446 aaPredicted RBP11.62□□□□□ -0.55
CLCN3-210ENST00000515420 RIPPLY2Q5TAB7 128 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 OR4F3Q6IEY1 312 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 AAGABQ6PD74 315 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 ENPP6Q6UWR7 440 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 IFNEQ86WN2 208 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 OR4K17Q8NGC6 315 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 OR14L1PQ8NHC6 308 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 ACTRT2Q8TDY3 377 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 TBL1XR1Q9BZK7 514 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 PTGES2Q9H7Z7 377 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 GPATCH2Q9NW75 528 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 TAS2R10Q9NYW0 307 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 TNFRSF10DQ9UBN6 386 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 DKKL1Q9UK85 242 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 FBXL2Q9UKC9 423 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 PCDHGB4Q9UN71 923 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 FAF1Q9UNN5 650 aaPredicted RBP11.62□□□□□ -0.55
CLCN3-210ENST00000515420 RNF6Q9Y252 685 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 SLC6A5Q9Y345 797 aa11.62□□□□□ -0.55
CLCN3-210ENST00000515420 A0A1W2PQD3 144 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 DUXAA6NLW8 204 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 LINC01387J3KSC0 135 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 HNRNPRO43390 633 aaKnown RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 SCO2O43819 266 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 SCN2BO60939 215 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 EPPINO95925 133 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 AK1P00568 194 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 GLI4P10075 376 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 KITP10721 976 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms