RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TRIML2Q8N7C3 387 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 WDSUB1Q8N9V3 476 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 OR4C3Q8NH37 302 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 ITCHQ96J02 903 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 OR51I1Q9H343 314 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 LDAHQ9H6V9 325 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 EXO5Q9H790 373 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 RMND5AQ9H871 391 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 QPCTLQ9NXS2 382 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 TRIM33Q9UPN9 1127 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 C15orf41Q9Y2V0 281 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 PCDHGB3Q9Y5G1 929 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 HRH3Q9Y5N1 445 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 WIF1Q9Y5W5 379 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 TRGV8A0A0C4DH27 118 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 DUXAA6NLW8 204 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 NR5A2O00482 541 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SLC19A2O60779 497 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SEMA7AO75326 666 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 IGHG3P01860 377 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 STSP08842 583 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 CD1EP15812 388 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ABOP16442 354 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ELAVL4P26378 380 aaKnown RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 PTPN6P29350 595 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 CLK3P49761 638 aaKnown RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 ARFIP2P53365 341 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 IRX1P78414 480 aaPredicted RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 TOMM20Q15388 145 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP46-209ENST00000514536 DCST2Q5T1A1 773 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 C1QL3Q5VWW1 255 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 TNFAIP8L2Q6P589 184 aaPredicted RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 MSANTD1Q6ZTZ1 278 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 TRILQ7L0X0 811 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 MARCH3Q86UD3 253 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 NEURL3Q96EH8 262 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ZNF317Q96PQ6 595 aaPredicted RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 G6PC3Q9BUM1 346 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ABCG2Q9UNQ0 655 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 RELNP78509 3460 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 C17orf51A8MQB3 221 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 CBR3O75828 277 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ANP32DO95626 131 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
USP46-209ENST00000514536 OR12D1P0DN82 309 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ATP6V1C1P21283 382 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 PTGS2P35354 604 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 TRPC1P48995 793 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 STX5Q13190 355 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 C3AR1Q16581 482 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.37
USP46-209ENST00000514536 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 METTL21CQ5VZV1 264 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ARHGAP11AQ6P4F7 1023 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SLC2A7Q6PXP3 512 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 APOOLQ6UXV4 268 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 PLCZ1Q86YW0 608 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 MIPOL1Q8TD10 442 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 DUSP19Q8WTR2 217 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 XAGE5Q8WWM1 108 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 GTF2H4Q92759 462 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 RAB8BQ92930 207 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SPDL1Q96EA4 605 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 UBQLN3Q9H347 655 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 RABEP2Q9H5N1 569 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ZNF385DQ9H6B1 395 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 SDHAF3Q9NRP4 125 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
USP46-209ENST00000514536 ZGRF1Q86YA3 2104 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 A0A1B0GVC2 190 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 NPIPA2E9PIF3 369 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 NPIPA3F8WFD2 350 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 ADAM10O14672 748 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 LRRTM2O43300 516 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 SUSD5O60279 629 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 AGFG2O95081 481 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 TBXA2RP21731 343 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 LCN1P31025 176 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 GYS2P54840 703 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 CASP6P55212 293 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
USP46-209ENST00000514536 RCAN2Q14206 197 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
USP46-209ENST00000514536 Q6ZPB1 254 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms