RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 FBXO48Q5FWF7 155 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 HENMT1Q5T8I9 393 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 RAB12Q6IQ22 244 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SCIMPQ6UWF3 145 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 MAMDC2Q7Z304 686 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GLT6D1Q7Z4J2 308 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CDH24Q86UP0 819 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GLCCI1Q86VQ1 547 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 IFNEQ86WN2 208 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 KIF18BQ86Y91 864 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 RBFAQ8N0V3 343 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF680Q8NEM1 530 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 OR52I1Q8NGK6 324 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CDC26Q8NHZ8 85 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 OR52E6Q96RD3 313 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ASPNQ9BXN1 380 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SLC12A9Q9BXP2 914 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 POLDIP3Q9BY77 421 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GPR34Q9UPC5 381 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PCDHGC4Q9Y5F7 938 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 B9A039 149 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 BTN3A1O00481 513 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CTDSPLO15194 276 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SLC16A5O15375 505 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF749O43361 778 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 EIF4E2O60573 245 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 LALBAP00709 142 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 TNFP01375 233 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 LIMS3P0CW19 117 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 LIMS4P0CW20 117 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CD37P11049 281 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 DRD2P14416 443 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 BDKRB1P46663 353 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 IL2P60568 153 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 BDH1Q02338 343 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CARTPTQ16568 116 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 RSBN1Q5VWQ0 802 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ASB11Q8WXH4 323 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PTP4A1Q93096 173 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 COX14Q96I36 57 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 EXOC2Q96KP1 924 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 TIMM29Q9BSF4 260 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 APOOQ9BUR5 198 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SLC32A1Q9H598 525 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 WDR26Q9H7D7 661 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 NT5DC2Q9H857 520 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ABCB9Q9NP78 766 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 A4GALTQ9NPC4 353 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CYSLTR2Q9NS75 346 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 LYARQ9NX58 379 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 WARS2Q9UGM6 360 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PRAMEF33A0A0G2JMD5 474 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 WASHC1A8K0Z3 465 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GALR3O60755 368 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PRAMEF10O60809 474 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 TSC22D2O75157 780 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PDGFAP04085 211 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CYP4B1P13584 511 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF250P15622 560 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ENGP17813 658 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PRKAR1BP31321 381 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 AKT1P31749 480 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ETV5P41161 510 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 RORCP51449 518 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 BLVRAP53004 296 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 DCDP81605 110 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CACNG1Q06432 222 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 RBBP4Q09028 425 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ELOCQ15369 112 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 P2RY14Q15391 338 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SF3A2Q15428 464 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 COX20Q5RI15 118 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 DOK6Q6PKX4 331 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GCNT7Q6ZNI0 430 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 PLEKHM3Q6ZWE6 761 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GKN2Q86XP6 184 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 KCNC2Q96PR1 638 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 INSM2Q96T92 566 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GPA33Q99795 319 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ABCG8Q9H221 673 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 RIBC2Q9H4K1 309 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SEMA4GQ9NTN9 838 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 C2orf42Q9NWW7 574 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CHST2Q9Y4C5 530 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 A0A0A6YYJ9 748 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PLSCR5A0PG75 271 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CLIC1O00299 241 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 OR2A4O95047 310 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 DLGAP3O95886 979 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ARAFP10398 606 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PNLIPP16233 465 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF8P17098 575 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GABRA5P31644 462 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GPR1P46091 355 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 RPL38P63173 70 aaKnown RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 FABP5Q01469 135 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 IRF4Q15306 451 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms