RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PGM1P36871 562 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 RFX3P48380 749 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 HLCSP50747 726 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PNLIPRP2P54317 469 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 POLE2P56282 527 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ARG2P78540 354 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 CDK6Q00534 326 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 OC90Q02509 493 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 MFAP5Q13361 173 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 NNATQ16517 81 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ZSCAN26Q16670 478 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 LACTB2Q53H82 288 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 RABL3Q5HYI8 236 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 EXOSC6Q5RKV6 272 aaKnown RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 DCST2Q5T1A1 773 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PRAMEF8Q5VWM4 474 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PRAMEF7Q5VXH5 474 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 FCRLBQ6BAA4 426 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 HEPHL1Q6MZM0 1159 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 REEP3Q6NUK4 255 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 C8orf82Q6P1X6 216 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 LRRC74BQ6ZQY2 392 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 LINC00696Q6ZRV3 163 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 IFNEQ86WN2 208 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 HPS6Q86YV9 775 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF527Q8NB42 609 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 FDCSPQ8NFU4 85 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 OR2T12Q8NG77 320 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 FBXO30Q8TB52 745 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 FAM110BQ8TC76 370 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 SPPL2AQ8TCT8 520 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 SLC38A5Q8WUX1 472 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PSMF1Q92530 271 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 OMA1Q96E52 524 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF583Q96ND8 569 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ADOQ96SZ5 270 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 SECISBP2Q96T21 854 aaKnown RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 SDF2Q99470 211 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 THTPAQ9BU02 230 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 SLC25A18Q9H1K4 315 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ALG2Q9H553 416 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PIF1Q9H611 641 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ARMC7Q9H6L4 198 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 TIMMDC1Q9NPL8 285 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 UBQLN4Q9NRR5 601 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 CMTM6Q9NX76 183 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ABCD2Q9UBJ2 740 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ANGPT4Q9Y264 503 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 GXYLT2A0PJZ3 443 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 FAM220BPB1ANY3 271 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 H3BNH8 94 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 GSC2O15499 205 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 RRP9O43818 475 aaKnown RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 CEACAM4O75871 244 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 DNAJB5O75953 348 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 PDE9AO76083 593 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 FBXO45P0C2W1 286 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SFTPCP11686 197 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 ME2P23368 584 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 MVDP53602 400 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 RAPSNQ13702 412 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SCARB2Q14108 478 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 VEZF1Q14119 521 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SELPLGQ14242 412 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 ZSWIM7Q19AV6 140 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 VMACQ2NL98 169 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 FLYWCH1Q4VC44 716 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SLC22A10Q63ZE4 541 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 B3GNTL1Q67FW5 361 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 IL20RBQ6UXL0 311 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 NPSR1Q6W5P4 371 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 NET1Q7Z628 596 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 PATL1Q86TB9 770 aaKnown RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 PEX5LQ8IYB4 626 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 FBXW8Q8N3Y1 598 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 ZADH2Q8N4Q0 377 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 FAM13CQ8NE31 585 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 HIPK4Q8NE63 616 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 BHLHE22Q8NFJ8 381 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 OR4N2Q8NGD1 307 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 BBS10Q8TAM1 723 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SLC26A7Q8TE54 656 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 OIT3Q8WWZ8 545 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 HAS2Q92819 552 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 POP5Q969H6 163 aaKnown RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SPACA9Q96E40 222 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 OTUB1Q96FW1 271 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SMAD5Q99717 465 aaKnown RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 RNF32Q9H0A6 362 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 ADNPQ9H2P0 1102 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 IKZF5Q9H5V7 419 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF552Q9H707 407 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 BCL2L10Q9HD36 194 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SDHAF3Q9NRP4 125 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 CNIH4Q9P003 139 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 LRFN1Q9P244 771 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms