RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 THAP5Q7Z6K1 395 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
PVT1-203ENST00000513868 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 PLPP5Q8NEB5 264 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 OR7G1Q8NGA0 311 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 SLC7A13Q8TCU3 470 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 FBLIM1Q8WUP2 373 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 ITPAQ9BY32 194 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 NDRG4Q9ULP0 352 aaKnown RBP11.91□□□□□ -0.5
PVT1-203ENST00000513868 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
PVT1-203ENST00000513868 SH3PXD2BA1X283 911 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 BCKDKO14874 412 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 FLRT2O43155 660 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 UGT2B11O75310 529 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 FGF5P12034 268 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 NID1P14543 1247 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 ELK4P28324 431 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 RYKP34925 604 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 ZNF136P52737 540 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 SMIM11AP58511 58 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 HOXC5Q00444 222 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 TRA2AQ13595 282 aaKnown RBP eCLIP11.9□□□□□ -0.55e-7■■■■□ 26.4
PVT1-203ENST00000513868 KEAP1Q14145 624 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 ELAVL1Q15717 326 aaKnown RBP11.9□□□□□ -0.5
PVT1-203ENST00000513868 NSDHLQ15738 373 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 CTU2Q2VPK5 515 aaKnown RBP11.9□□□□□ -0.5
PVT1-203ENST00000513868 KCTD21Q4G0X4 260 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 NKAIN1Q4KMZ8 207 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 FGD3Q5JSP0 725 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 DCST1Q5T197 706 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 RNF220Q5VTB9 566 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 PPP1R3BQ86XI6 285 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 CCDC71Q8IV32 467 aaPredicted RBP11.9□□□□□ -0.5
PVT1-203ENST00000513868 PRSS58Q8IYP2 241 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 AQP11Q8NBQ7 271 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 MORN4Q8NDC4 146 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 STT3BQ8TCJ2 826 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 RHBDD1Q8TEB9 315 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 DIO2Q92813 273 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 PITX2Q99697 317 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 FNDC11Q9BVV2 318 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
PVT1-203ENST00000513868 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
PVT1-203ENST00000513868 FTSJ1Q9UET6 329 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 MKL2Q9ULH7 1088 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 NTNG1Q9Y2I2 539 aa11.9□□□□□ -0.5
PVT1-203ENST00000513868 CDHR4A6H8M9 788 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 EFCAB7A8K855 629 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 NPIPB9F8W1W9 429 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 FAAHO00519 579 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 BCAS1O75363 584 aaPredicted RBP11.89□□□□□ -0.51
PVT1-203ENST00000513868 OXSR1O95747 527 aaPredicted RBP11.89□□□□□ -0.51
PVT1-203ENST00000513868 THY1P04216 161 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 TFAP2AP05549 437 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 CD59P13987 128 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 POU2F1P14859 743 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 CDH2P19022 906 aaPredicted RBP11.89□□□□□ -0.51
PVT1-203ENST00000513868 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
PVT1-203ENST00000513868 CD47Q08722 323 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 LIN52Q52LA3 116 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 MRPL2Q5T653 305 aaKnown RBP11.89□□□□□ -0.51
PVT1-203ENST00000513868 PODNL1Q6PEZ8 512 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 BPHLQ86WA6 291 aaPredicted RBP11.89□□□□□ -0.51
PVT1-203ENST00000513868 TAGAPQ8N103 731 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 C7orf57Q8NEG2 295 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 SLC2A12Q8TD20 617 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 CLIP3Q96DZ5 547 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 HRASLS5Q96KN8 279 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 NUDT9Q9BW91 350 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 SLC7A5P2Q9GIP4 190 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 CTPS2Q9NRF8 586 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 SEMA4GQ9NTN9 838 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 PRODH2Q9UF12 536 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 SLC13A4Q9UKG4 626 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 POFUT2Q9Y2G5 429 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
PVT1-203ENST00000513868 TTC36A6NLP5 189 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 CNOT3O75175 753 aaKnown RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 ZGLP1P0C6A0 271 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 PRG2P13727 222 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 CSTF2P33240 577 aaKnown RBP eCLIP11.88□□□□□ -0.513e-7■■□□□ 13.6
PVT1-203ENST00000513868 RNF144AP50876 292 aaPredicted RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 CDH15P55291 814 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 RGS8P57771 180 aaPredicted RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 RPP38P78345 283 aaKnown RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 DCDP81605 110 aaKnown RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 IL11RAQ14626 422 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 SF3A2Q15428 464 aaKnown RBP11.88□□□□□ -0.51
PVT1-203ENST00000513868 NNATQ16517 81 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 MEP1AQ16819 746 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 FLYWCH1Q4VC44 716 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 EIPR1Q53HC9 387 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 ENTPD8Q5MY95 495 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 LAIR1Q6GTX8 287 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 LCN10Q6JVE6 187 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 KLHL17Q6TDP4 642 aa11.88□□□□□ -0.51
PVT1-203ENST00000513868 Q6ZPB1 254 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms