RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RTN4RQ9BZR6 473 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 DDX47Q9H0S4 455 aaKnown RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 C12orf49Q9H741 205 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 MANSC1Q9H8J5 431 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 IPPKQ9H8X2 491 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 FOLH1BQ9HBA9 442 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 NMRAL1Q9HBL8 299 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 SDHAF3Q9NRP4 125 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 PAQR5Q9NXK6 330 aaPredicted RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 CISD1Q9NZ45 108 aaKnown RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 AHSPQ9NZD4 102 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 PSME2Q9UL46 239 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 KCNS2Q9ULS6 477 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 ZNF780BQ9Y6R6 833 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 IGLV3-32A0A0A0MS00 114 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 SYCE1LA8MT33 242 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 SHISA9B4DS77 424 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 SHISA8B8ZZ34 492 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 TP73O15350 636 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 KCNAB3O43448 404 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 RAMP1O60894 148 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 CTAGE8P0CG41 777 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 ZNF17P17021 662 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 IL32P24001 234 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 CDH11P55287 796 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 PDIA2Q13087 525 aaKnown RBP9.73□□□□□ -0.85
DDX41-216ENST00000513562 GTF2H2Q13888 395 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 FAM120AOSQ5T036 256 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 AGAP6Q5VW22 663 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 C11orf71Q6IPW1 123 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 MFSD12Q6NUT3 480 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 GTF2H2CQ6P1K8 395 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 TFAP2EQ6VUC0 442 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 COMMD6Q7Z4G1 85 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 GOLGA7Q7Z5G4 137 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 GALNT10Q86SR1 603 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 MEX3DQ86XN8 651 aaKnown RBP9.73□□□□□ -0.85
DDX41-216ENST00000513562 SLC44A2Q8IWA5 706 aaPredicted RBP9.73□□□□□ -0.85
DDX41-216ENST00000513562 CTAGE4Q8IX94 777 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 ZNF525Q8N782 197 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 OR9A2Q8NGT5 310 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 C10orf105Q8TEF2 133 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 CDKL2Q92772 493 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 TM4SF18Q96CE8 201 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 HBEGFQ99075 208 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
DDX41-216ENST00000513562 L2HGDHQ9H9P8 463 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 FBXO34Q9NWN3 711 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 FAM120CQ9NX05 1096 aaKnown RBP9.73□□□□□ -0.85
DDX41-216ENST00000513562 FLRT3Q9NZU0 649 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 TXNDC16Q9P2K2 825 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 JRKLQ9Y4A0 524 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 OR10H1Q9Y4A9 318 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 HEATR5AQ86XA9 2040 aa9.73□□□□□ -0.85
DDX41-216ENST00000513562 SLC35F4A4IF30 521 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 OR7A17O14581 309 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 ADAMDEC1O15204 470 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 CXCL13O43927 109 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 SYNGR4O95473 234 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 CLDN9O95484 217 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 LTA4HP09960 611 aaKnown RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 PYGBP11216 843 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 PTNP21246 168 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 CFPP27918 469 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 CDC25BP30305 580 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 GP5P40197 560 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 GZMKP49863 264 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 ALDH18A1P54886 795 aaKnown RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 C21orf58P58505 322 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 GALNT1Q10472 559 aaPredicted RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 PFKFB4Q16877 469 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 ERCC6LQ2NKX8 1250 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 LGSNQ5TDP6 509 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 FRG2Q64ET8 278 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 FAM166AQ6J272 317 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 RAPH1Q70E73 1250 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 CMC1Q7Z7K0 106 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 TBC1D1Q86TI0 1168 aaPredicted RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 WDR75Q8IWA0 830 aaKnown RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 ZBED8Q8IZ13 594 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 BANPQ8N9N5 519 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 RHEBL1Q8TAI7 183 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 DUSP19Q8WTR2 217 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 FAM168AQ92567 244 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 PROX1Q92786 737 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 KAT2AQ92830 837 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 KISS1RQ969F8 398 aaPredicted RBP9.72□□□□□ -0.85
DDX41-216ENST00000513562 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 FRG2BQ96QU4 278 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 FAIM2Q9BWQ8 316 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 ADAM19Q9H013 955 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 CHODLQ9H9P2 273 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 UTS2RQ9UKP6 389 aa9.72□□□□□ -0.85
DDX41-216ENST00000513562 GOLGA8QA0A0J9YX86 632 aa9.71□□□□□ -0.86
DDX41-216ENST00000513562 CCDC189A1A4V9 331 aa9.71□□□□□ -0.86
DDX41-216ENST00000513562 GOLGA8OA6NCC3 632 aa9.71□□□□□ -0.86
DDX41-216ENST00000513562 GOLGA8NF8WBI6 632 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms