RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MMP21Q8N119 569 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 FBXO25Q8TCJ0 367 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 CREB3L1Q96BA8 519 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 C7orf34Q96L11 122 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 ATRNL1Q5VV63 1379 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 A0A0B4J203 849 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 LIASO43766 372 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SLC5A2P31639 672 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 CAV2P51636 162 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SLC25A3Q00325 362 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 HMGCS1Q01581 520 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 GPR17Q13304 367 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 Q1RN00 199 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 LEG1Q6P5S2 330 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 MEX3BQ6ZN04 569 aaKnown RBP8.46□□□□□ -1.06
VCAN-208ENST00000512590 MAL2Q969L2 176 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 FBXO17Q96EF6 278 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 TSGA13Q96PP4 275 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 APOOQ9BUR5 198 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 NMES1Q9C002 83 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 CHRAC1Q9NRG0 131 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SLC9B1P1A6NJY1 282 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SLC31A2O15432 143 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SIAH2O43255 324 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SLC25A17O43808 307 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 OPN1SWP03999 348 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 AREGP15514 252 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 ENPP1P22413 925 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 ELK4P28324 431 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 AGTR1P30556 359 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 MTPNP58546 118 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 FUT2Q10981 343 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 COL9A2Q14055 689 aaPredicted RBP8.46□□□□□ -1.06
VCAN-208ENST00000512590 VEZF1Q14119 521 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 MEP1AQ16819 746 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 MICAQ29983 383 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 MTX3Q5HYI7 312 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 VASNQ6EMK4 673 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 LPCAT3Q6P1A2 487 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 OR8H3Q8N146 312 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SLC35G3Q8N808 338 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 OR14K1Q8NGZ2 314 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 STK35Q8TDR2 534 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 ITPKCQ96DU7 683 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 CMSS1Q9BQ75 279 aaKnown RBP8.46□□□□□ -1.06
VCAN-208ENST00000512590 KCNJ16Q9NPI9 418 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 SPHK1Q9NYA1 384 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 MMACHCQ9Y4U1 282 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 CDH10Q9Y6N8 788 aa8.46□□□□□ -1.06
VCAN-208ENST00000512590 KIR2DS5A0A0G2JLQ3 304 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 A0A0G2JNG1 304 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF814B7Z6K7 855 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 KIR2DS3K7RE56 304 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PIRO00625 290 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 C6orf47O95873 294 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GPIP06744 558 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GRPP07492 148 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 ITGB8P26012 769 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CRABP1P29762 137 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 MLLT10P55197 1068 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CDK6Q00534 326 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 KIR2DS5Q14953 304 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 MS4A13Q5J8X5 152 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 RPL13AP3Q6NVV1 102 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 MAMSTRQ6ZN01 415 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 KMT5CQ86Y97 462 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 TCEAL8Q8IYN2 117 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CBR4Q8N4T8 237 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 RPL3LQ92901 407 aaKnown RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 NT5C3BQ969T7 300 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PIGQQ9BRB3 760 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 LRRC19Q9H756 370 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF71Q9NQZ8 489 aaPredicted RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 GPR83Q9NYM4 423 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ENTPD2Q9Y5L3 495 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 NUMBLQ9Y6R0 609 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 FAM237BA0A1B0GVD1 139 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 C12orf71A8MTZ7 269 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ADAM20O43506 726 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 AGTR2P50052 363 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PRKXP51817 358 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 KCNJ11Q14654 390 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 WSCD2Q2TBF2 565 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF684Q5T5D7 378 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PODNL1Q6PEZ8 512 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ABHD15Q6UXT9 468 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 TRIM73Q86UV7 250 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GID4Q8IVV7 300 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CISD2Q8N5K1 135 aaKnown RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 OR10G3Q8NGC4 313 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 UBQLN2Q9UHD9 624 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 RHBDD3Q9Y3P4 386 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PCYT1BQ9Y5K3 369 aaPredicted RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 FEZF1A0PJY2 475 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 G3V3Y1 287 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 LSM1O15116 133 aaKnown RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 AIREO43918 545 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms