RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ASCL3Q9NQ33 180 aa6.89□□□□□ -1.31
CPNE4-208ENST00000511604 LHX9Q9NQ69 397 aa6.89□□□□□ -1.31
CPNE4-208ENST00000511604 SIRT7Q9NRC8 400 aa6.89□□□□□ -1.31
CPNE4-208ENST00000511604 SF3B6Q9Y3B4 125 aaKnown RBP6.89□□□□□ -1.31
CPNE4-208ENST00000511604 A8MVJ9 347 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 GFYI3L273 518 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 M0QZ92 97 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 IMPA2O14732 288 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 WNT9AO14904 365 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PRAF2O60831 178 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 SC5DO75845 299 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 RHOP08100 348 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ANXA8P13928 327 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 MSX1P28360 303 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 NOS3P29474 1203 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 KIR3DL2P43630 455 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 HCCSP53701 268 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 TPI1P60174 286 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PSMA6P60900 246 aaKnown RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 FABP5Q01469 135 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 HMGCS1Q01581 520 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 SGCGQ13326 291 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 NAE1Q13564 534 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ATXN7L2Q5T6C5 722 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PAQR3Q6TCH7 311 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 IL27RAQ6UWB1 636 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 CLEC9AQ6UXN8 241 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 LRRC28Q86X40 367 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 LAS2Q8IYD9 372 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 LRRC18Q8N456 261 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PPHLN1Q8NEY8 458 aaKnown RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 DBF4BQ8NFT6 615 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 OR56A4Q8NGH8 313 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 OR5M3Q8NGP4 307 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 OR1S2Q8NGQ3 325 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 CASD1Q96PB1 797 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ABHD1Q96SE0 405 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ZDHHC5Q9C0B5 715 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 LINC00597Q9H2U6 94 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 FZD3Q9NPG1 666 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 STOX2Q9P2F5 926 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 UXTQ9UBK9 157 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 GAB2Q9UQC2 676 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 KCNIP3Q9Y2W7 256 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 NPEPPSL1A6NEC2 478 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 TNFRSF11BO00300 401 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 LDLRAD4O15165 306 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 OR2T1O43869 369 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 GUCA1CO95843 209 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 OTCP00480 354 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 MT-ND4P03905 459 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 HLA-DQB2P05538 268 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 UBBP0CG47 229 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 UBCP0CG48 685 aaKnown RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 OR8G3PP0DMU2 310 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 CPN1P15169 458 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 CSF2RAP15509 400 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 C5AR1P21730 350 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 MAPK3P27361 379 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 HTR2AP28223 471 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 RBMS1P29558 406 aaKnown RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 CNR2P34972 360 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 RFX3P48380 749 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 RPS27AP62979 156 aaKnown RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 UBA52P62987 128 aaKnown RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ZXDBP98169 803 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 SEMG2Q02383 582 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PLA2G7Q13093 441 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 BIKQ13323 160 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 GAB1Q13480 694 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 DOC2AQ14183 400 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 INPP5JQ15735 1006 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ARSIQ5FYB1 569 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 KRBOX4Q5JUW0 171 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ATAT1Q5SQI0 421 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ATPAF1Q5TC12 328 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ANXA8L1Q5VT79 327 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 RNLSQ5VYX0 342 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 SLC30A6Q6NXT4 461 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 MTFR2Q6P444 385 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 VITQ6UXI7 678 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 NHLRC1Q6VVB1 395 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 COMTD1Q86VU5 262 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PRSS35Q8N3Z0 413 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 FBXO39Q8N4B4 442 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ZNF614Q8N883 585 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 C7orf34Q96L11 122 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 SMIM14Q96QK8 99 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 IL4I1Q96RQ9 567 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 PKP4Q99569 1192 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 MESP1Q9BRJ9 268 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 FDXACB1Q9BRP7 624 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-208ENST00000511604 ATG101Q9BSB4 218 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 SEC11CQ9BY50 192 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
CPNE4-208ENST00000511604 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms