RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
DDX41-212ENST00000511040 CASP9P55211 416 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 GRAMD1BQ3KR37 738 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 MARCH3Q86UD3 253 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 MARVELD2Q8N4S9 558 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 COX18Q8N8Q8 333 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 FAM83FQ8NEG4 500 aaPredicted RBP12.74□□□□□ -0.37
DDX41-212ENST00000511040 OR8J2Q8NGG1 315 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 PSMA8Q8TAA3 256 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 NEIL3Q8TAT5 605 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 SFXN5Q8TD22 340 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 ACTRT2Q8TDY3 377 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 TESCQ96BS2 214 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 NEUROD4Q9HD90 331 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 GPATCH2Q9NW75 528 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 QPCTLQ9NXS2 382 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 FAF1Q9UNN5 650 aaPredicted RBP12.74□□□□□ -0.37
DDX41-212ENST00000511040 KCNE3Q9Y6H6 103 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 HECTD1Q9ULT8 2610 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 RNF103-CHMP3A0A140T963 221 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 OR14I1A6ND48 311 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 E9PLN8 166 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 BCKDKO14874 412 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 GMFGO60234 142 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 SCN2BO60939 215 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 GP1BBP13224 206 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
DDX41-212ENST00000511040 CDC73Q6P1J9 531 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 MTFR2Q6P444 385 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 ZCCHC12Q6PEW1 402 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 EPGNQ6UW88 154 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 MAMDC2Q7Z304 686 aaPredicted RBP12.73□□□□□ -0.37
DDX41-212ENST00000511040 PLCZ1Q86YW0 608 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 RNF138Q8WVD3 245 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 SARAFQ96BY9 339 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 THOC1Q96FV9 657 aaKnown RBP12.73□□□□□ -0.37
DDX41-212ENST00000511040 MAELQ96JY0 434 aaKnown RBP12.73□□□□□ -0.37
DDX41-212ENST00000511040 ZBTB18Q99592 522 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 VKORC1Q9BQB6 163 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 BTBD2Q9BX70 525 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 ACTRT3Q9BYD9 372 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 TP63Q9H3D4 680 aaPredicted RBP12.73□□□□□ -0.37
DDX41-212ENST00000511040 ACBD3Q9H3P7 528 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 DSN1Q9H410 356 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
DDX41-212ENST00000511040 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 PCDHGB4Q9UN71 923 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
DDX41-212ENST00000511040 PRSS51A0A1B0GVH4 220 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 UBDO15205 165 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 C1QCP02747 245 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 IDO1P14902 403 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 IDH3AP50213 366 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 RNF144AP50876 292 aaPredicted RBP12.72□□□□□ -0.37
DDX41-212ENST00000511040 PSMD4P55036 377 aaKnown RBP12.72□□□□□ -0.37
DDX41-212ENST00000511040 POU6F2P78424 691 aaPredicted RBP12.72□□□□□ -0.37
DDX41-212ENST00000511040 CDSNQ15517 529 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 DCST1Q5T197 706 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 WLSQ5T9L3 541 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 ANXA8L1Q5VT79 327 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 APOOLQ6UXV4 268 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 RPTNQ6XPR3 784 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 ACAD11Q709F0 780 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 C6orf120Q7Z4R8 191 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 GATSQ8NAP1 163 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 OR4K17Q8NGC6 315 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 OR4C3Q8NH37 302 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 OR14L1PQ8NHC6 308 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 ADAMTS15Q8TE58 950 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 OR7D2Q96RA2 312 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 OR52E6Q96RD3 313 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 STACQ99469 402 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 EBF4Q9BQW3 602 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 PIGUQ9H490 435 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 SERHL2Q9H4I8 314 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 GIN1Q9NXP7 522 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 MED11Q9P086 117 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 DKKL1Q9UK85 242 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 ABCG2Q9UNQ0 655 aa12.72□□□□□ -0.37
DDX41-212ENST00000511040 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
DDX41-212ENST00000511040 UTP20O75691 2785 aaKnown RBP12.72□□□□□ -0.37
DDX41-212ENST00000511040 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
DDX41-212ENST00000511040 PCNX1Q96RV3 2341 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 SLC22A3O75751 556 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 CBR3O75828 277 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 NPIPA8P0DM63 369 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 BMP7P18075 431 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 MATN1P21941 496 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 ACVR2AP27037 513 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 CLK3P49761 638 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms