RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MAGEA12P43365 314 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 EEF1A1P68104 462 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 SLC35A1P78382 337 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 MELKQ14680 651 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 EXOC3L2Q2M3D2 409 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 PDZK1Q5T2W1 519 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 TMEM154Q6P9G4 183 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 CYHR1Q6ZMK1 362 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 VASH2Q86V25 355 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 CHERPQ8IWX8 916 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 MMP21Q8N119 569 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 OR5T3Q8NGG3 340 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ZC3H10Q96K80 434 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 CCDC106Q9BWC9 280 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 DENND2DQ9H6A0 471 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 PLPP1O14494 284 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 PTHP01270 115 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 FURINP09958 794 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 FKBP2P26885 142 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 APLNRP35414 380 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 SLC15A1P46059 708 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ATP12AP54707 1039 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 SLC26A5P58743 744 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 OR7A5Q15622 319 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 BORAQ6PGQ7 559 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 EXD3Q8N9H8 876 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 C9orf43Q8TAL5 461 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 LRTOMTQ8WZ04 291 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 C8orf44Q96CB5 159 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 SENP5Q96HI0 755 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 OR4K3Q96R72 315 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ZNF184Q99676 751 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 MAGIXQ9H6Y5 334 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 RNPEPL1Q9HAU8 725 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 OCIAD1Q9NX40 245 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ANKRD10Q9NXR5 420 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 FBXL4Q9UKA2 621 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ATG4BQ9Y4P1 393 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 PRAMEF33A0A0G2JMD5 474 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 OR2A25A4D2G3 310 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 FIGNL2A6NMB9 653 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 TAF4O00268 1085 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 RGS5O15539 181 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 OR5F1O95221 314 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ETS2P15036 469 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 GBX2P52951 348 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 ARHGAP11AQ6P4F7 1023 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ULK3Q6PHR2 472 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 GFRALQ6UXV0 394 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 D2HGDHQ8N465 521 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 OR5D16Q8NGK9 328 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 CCDC115Q96NT0 180 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 TSSK6Q9BXA6 273 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ENKD1Q9H0I2 346 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 P4HTMQ9NXG6 502 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 GPR160Q9UJ42 338 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 IQCMA0A1B0GVH7 501 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 FAM166BA8MTA8 275 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 HPP00738 406 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 IGLV3-19P01714 112 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 MT-ND1P03886 318 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 MC2RQ01718 297 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 RPS26P11Q5JNZ5 115 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 FCRLBQ6BAA4 426 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 FRMPD2BQ6IN97 320 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 TMEM207Q6UWW9 146 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 ZSCAN4Q8NAM6 433 aaPredicted RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 ZCCHC14Q8WYQ9 949 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 CRELD1Q96HD1 420 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 SGCZQ96LD1 299 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 AMDHD1Q96NU7 426 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 PIGUQ9H490 435 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 DDX31Q9H8H2 851 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 CD248Q9HCU0 757 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 PNPLA3Q9NST1 481 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 RHCGQ9UBD6 479 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 TESQ9UGI8 421 aaKnown RBP4.79□□□□□ -1.64
PHF3-210ENST00000509876 POMPQ9Y244 141 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
PHF3-210ENST00000509876 KCNE1BA0A087WTH5 132 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 TRGV8A0A0C4DH27 118 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.78□□□□□ -1.64
PHF3-210ENST00000509876 SERINC4A6NH21 518 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 FANCGO15287 622 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 FMO6PO60774 539 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 SLC43A1O75387 559 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 C8BP07358 591 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 ENPP1P22413 925 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 GCAP28676 217 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 KDELR2P33947 212 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 TRHRP34981 398 aaPredicted RBP4.78□□□□□ -1.64
PHF3-210ENST00000509876 CPOXP36551 454 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 OR1E2P47887 323 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 CARD18P57730 90 aa4.78□□□□□ -1.64
PHF3-210ENST00000509876 LACTB2Q53H82 288 aaPredicted RBP4.78□□□□□ -1.64
PHF3-210ENST00000509876 CES4AQ5XG92 561 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms