RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PINX1Q96BK5 328 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 MOB3AQ96BX8 217 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 SYTL4Q96C24 671 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM89AQ96GI7 184 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 SERPINB11Q96P15 392 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 TGM7Q96PF1 710 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 VN1R3Q9BXE9 311 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 ZDHHC6Q9H6R6 413 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 POLE4Q9NR33 117 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 SIRT7Q9NRC8 400 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 PSORS1C1Q9UIG5 152 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 PCDH11XQ9BZA7 1347 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 PCDH11YQ9BZA8 1340 aa6.94□□□□□ -1.3
PDGFRA-206ENST00000508170 KIAA0232Q92628 1395 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SERPINA5P05154 406 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GUSBP08236 651 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 RNH1P13489 461 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 PMCHP20382 165 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 EPHA3P29320 983 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CRABP1P29762 137 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GKP32189 559 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 MPIP34949 423 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 COILP38432 576 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC1A1P43005 524 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 TNFSF10P50591 281 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CLDN18P56856 261 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 BPIFB4P59827 614 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 PLP1P60201 277 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 RAD51Q06609 339 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SYPL1Q16563 259 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 QRICH1Q2TAL8 776 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ACCSLQ4AC99 568 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 LINC01620Q4KN68 170 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 C19orf35Q6ZS72 473 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GPR141Q7Z602 305 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CACUL1Q86Y37 369 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ADHFE1Q8IWW8 467 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GSPT2Q8IYD1 628 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC44A3Q8N4M1 653 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ZCCHC9Q8N567 271 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CSNK1A1LQ8N752 337 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 OR2V1Q8NHB1 315 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 HPS1Q92902 700 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NAT6Q93015 286 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SH3YL1Q96HL8 342 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 AMDHD1Q96NU7 426 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 TNFRSF13CQ96RJ3 184 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 JMJD8Q96S16 334 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GPR174Q9BXC1 333 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CD320Q9NPF0 282 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 THSD1Q9NS62 852 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 MMP24Q9Y5R2 645 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 UBN2Q6ZU65 1347 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 TMEM2Q9UHN6 1383 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF233A6NK53 670 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 AIREO43918 545 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 PFDN1O60925 122 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ETHE1O95571 254 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 IFNA5P01569 189 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GAPDHP04406 335 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CALB1P05937 261 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC2A1P11166 492 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ATP1B2P14415 290 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 GYPEP15421 78 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ARRB2P32121 409 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CYLC1P35663 651 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 LIPAP38571 399 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NKX2-5P52952 324 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ATP1B3P54709 279 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NXPH1P58417 271 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CFHR1Q03591 330 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 FOXE3Q13461 319 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CRMP1Q14194 572 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SLX4IPQ5VYV7 408 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 PLEKHA7Q6IQ23 1121 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 RNF207Q6ZRF8 634 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 H2BFWTQ7Z2G1 175 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 SYS1Q8N2H4 156 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 CCDC71LQ8N9Z2 235 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 LMNTD1Q8N9Z9 388 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NOA1Q8NC60 698 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 OR1L6Q8NGR2 347 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NANPQ8TBE9 248 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 S100PBPQ96BU1 408 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 EBNA1BP2Q99848 306 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 COPS4Q9BT78 406 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 MIS12Q9H081 205 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 PLGRKTQ9HBL7 147 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 PRSS16Q9NQE7 514 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 C1GALT1Q9NS00 363 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 EMCNQ9ULC0 261 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 OVOS2A0A0J9YW53 1432 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 OVOS2Q6IE36 1432 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 ZMYM6O95789 1325 aa6.93□□□□□ -1.3
PDGFRA-206ENST00000508170 NALCNQ8IZF0 1738 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC5A10A0PJK1 596 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF840PA6NDX5 716 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 FFAR3O14843 346 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 GPR42O15529 346 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms