RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TMEM79Q9BSE2 394 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 NAA11Q9BSU3 229 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-206ENST00000507875 HAUS8Q9BT25 410 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 GPR174Q9BXC1 333 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 SLC26A1Q9H2B4 701 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 C6orf106Q9H6K1 298 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-206ENST00000507875 NUDT15Q9NV35 164 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 IL20RAQ9UHF4 553 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 DMRT1Q9Y5R6 373 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 DNAJC15Q9Y5T4 150 aa6.65□□□□□ -1.35
CLCN3-206ENST00000507875 A0A1B0GVG6 124 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SAC3D1A6NKF1 404 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ARHGEF33A8MVX0 844 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SLC28A1O00337 649 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 PPP6CO00743 305 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CFLARO15519 480 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 AK1P00568 194 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 FESP07332 822 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 GSTM2P28161 218 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 PTPN6P29350 595 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SRP54P61011 504 aaKnown RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ABRQ12979 859 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 FASTKQ14296 549 aaKnown RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 PHKG1Q16816 387 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 Q5PR19 223 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SIGIRRQ6IA17 410 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CAPN13Q6MZZ7 669 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CDC73Q6P1J9 531 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ENPP7Q6UWV6 458 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SPATA19Q7Z5L4 167 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CACUL1Q86Y37 369 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 VRK3Q8IV63 474 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF679Q8IYX0 411 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 OFCC1Q8IZS5 231 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 NLGN4YQ8NFZ3 816 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 DUSP19Q8WTR2 217 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SKA2Q8WVK7 121 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 TFGQ92734 400 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 UBE2E3Q969T4 207 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 REPS1Q96D71 796 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 C3orf30Q96M34 536 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 NEU1Q99519 415 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 NPAS2Q99743 824 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 NUDT22Q9BRQ3 303 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SGPP1Q9BX95 441 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 TPK1Q9H3S4 243 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 KIR3DX1Q9H7L2 352 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 NT5DC2Q9H857 520 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CCDC167Q9P0B6 97 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 STOX2Q9P2F5 926 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 GMEB2Q9UKD1 530 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 PACSIN3Q9UKS6 424 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 OR1A2Q9Y585 309 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SPTY2D1-AS1A0A0U1RR47 76 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ATP6AP2A0A1C7CYW4 349 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM202A6NGA9 273 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 H3BNX3 289 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 TO15178 435 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CRCPO75575 148 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ATP6AP2O75787 350 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CLPXO76031 633 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 MFN2O95140 757 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CLDN9O95484 217 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 KRT6AP02538 564 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 KRT6BP04259 564 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ME2P23368 584 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 PRPH2P23942 346 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CD38P28907 300 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 MAT2AP31153 395 aaKnown RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 KRT6CP48668 564 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ACADVLP49748 655 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 TUBA4AP68366 448 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 KLC1Q07866 573 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 MAD2L1Q13257 205 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CEACAM7Q14002 265 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 RBBP7Q16576 425 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 CDONQ4KMG0 1287 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 AGKQ53H12 422 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 HIST2H2BCQ6DN03 193 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 HIST2H2BDQ6DRA6 164 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 DOK6Q6PKX4 331 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 AGTRAPQ6RW13 159 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 IZUMO2Q6UXV1 221 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF813Q6ZN06 617 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 Q6ZSR6 202 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 VASH2Q86V25 355 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 OR8K5Q8NH50 307 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 TWIST2Q8WVJ9 160 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 KLK6Q92876 244 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 DGAT2Q96PD7 388 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 INTS14Q96SY0 518 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 SLC5A7Q9GZV3 580 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 PELI2Q9HAT8 420 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 MRPL39Q9NYK5 338 aaKnown RBP6.64□□□□□ -1.35
CLCN3-206ENST00000507875 BCAP29Q9UHQ4 241 aa6.64□□□□□ -1.35
CLCN3-206ENST00000507875 F5P12259 2224 aa6.63□□□□□ -1.35
CLCN3-206ENST00000507875 KIR2DS5A0A0G2JLQ3 304 aa6.63□□□□□ -1.35
CLCN3-206ENST00000507875 A0A0G2JNG1 304 aa6.63□□□□□ -1.35
CLCN3-206ENST00000507875 A0A1W2PR77 199 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms