RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 DPP4P27487 766 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 ECHS1P30084 290 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 HSD17B3P37058 310 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 SIRPAP78324 504 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 PSG6Q00889 435 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 ENPP6Q6UWR7 440 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 LARP4Q71RC2 724 aaKnown RBP eCLIP8.11□□□□□ -1.112e-10■■□□□ 11.8
RPS3A-206ENST00000507485 GRAMD2AQ8IUY3 354 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 UBQLNLQ8IYU4 475 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 CDYL2Q8N8U2 506 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 FADS6Q8N9I5 356 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 OR2M3Q8NG83 312 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 UHMK1Q8TAS1 419 aaKnown RBP8.11□□□□□ -1.11
RPS3A-206ENST00000507485 EXOSC8Q96B26 276 aaKnown RBP8.11□□□□□ -1.11
RPS3A-206ENST00000507485 C11orf24Q96F05 449 aaPredicted RBP8.11□□□□□ -1.11
RPS3A-206ENST00000507485 PIK3IP1Q96FE7 263 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 APIPQ96GX9 242 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 ZNF845Q96IR2 970 aaPredicted RBP8.11□□□□□ -1.11
RPS3A-206ENST00000507485 PAFAH2Q99487 392 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 NPAS1Q99742 590 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 ACPTQ9BZG2 426 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 CDC42EP4Q9H3Q1 356 aaKnown RBP8.11□□□□□ -1.11
RPS3A-206ENST00000507485 PIGMQ9H3S5 423 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 DSN1Q9H410 356 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 BRF2Q9HAW0 419 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 AHSPQ9NZD4 102 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 EDARQ9UNE0 448 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 CFL2Q9Y281 166 aa8.11□□□□□ -1.11
RPS3A-206ENST00000507485 TRIM49D1C9J1S8 452 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SCO2O43819 266 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 FADS1O60427 444 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SMIM24O75264 130 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SMNDC1O75940 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
RPS3A-206ENST00000507485 ROS1P08922 2347 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 CHMP24386 653 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 GCAP28676 217 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 CD79BP40259 229 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 CLDN20P56880 219 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 TRA2BP62995 288 aaKnown RBP8.1□□□□□ -1.11
RPS3A-206ENST00000507485 GUSBP1Q15486 140 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SHEQ5VZ18 495 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 CSPG4Q6UVK1 2322 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SCIMPQ6UWF3 145 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 Q6ZS46 218 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 SLC44A2Q8IWA5 706 aaPredicted RBP8.1□□□□□ -1.11
RPS3A-206ENST00000507485 C16orf78Q8WTQ4 265 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 IGFBPL1Q8WX77 278 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 TMCO6Q96DC7 493 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 Q96MF0 132 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 TMEM237Q96Q45 408 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 KCNA7Q96RP8 456 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 KLHDC3Q9BQ90 382 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 EBPLQ9BY08 206 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 MED11Q9P086 117 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 VPS29Q9UBQ0 182 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 PRODH2Q9UF12 536 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 MCM8Q9UJA3 840 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 DKKL1Q9UK85 242 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 MRPS18CQ9Y3D5 142 aaKnown RBP8.1□□□□□ -1.11
RPS3A-206ENST00000507485 ZNF337Q9Y3M9 751 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 FBN3Q75N90 2809 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 DSCAMO60469 2012 aa8.1□□□□□ -1.11
RPS3A-206ENST00000507485 OR2M5A3KFT3 312 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 SLC22A20A6NK97 555 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 SMAD7O15105 426 aaKnown RBP8.09□□□□□ -1.11
RPS3A-206ENST00000507485 PCDH7O60245 1069 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 DLX3O60479 287 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 PLOD3O60568 738 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 GUCY1B2O75343 617 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 SASH3O75995 380 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 AQP8O94778 261 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 OTCP00480 354 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 THBDP07204 575 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 CRYGSP22914 178 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 UGT2B10P36537 528 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 MC3RP41968 323 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 PNLIPRP2P54317 469 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 CLCQ05315 142 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 GAB1Q13480 694 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 ZNF678Q5SXM1 525 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 C10orf62Q5T681 223 aaPredicted RBP8.09□□□□□ -1.11
RPS3A-206ENST00000507485 ANKRD34AQ69YU3 496 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 APOOLQ6UXV4 268 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 RELL1Q8IUW5 271 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 CNEP1R1Q8N9A8 125 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 ZNF610Q8N9Z0 462 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 PGM2Q96G03 612 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 MRPL57Q9BQC6 102 aaKnown RBP8.09□□□□□ -1.11
RPS3A-206ENST00000507485 MRPL46Q9H2W6 279 aaKnown RBP8.09□□□□□ -1.11
RPS3A-206ENST00000507485 UBTD1Q9HAC8 227 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 PFDN4Q9NQP4 134 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 TMEM216Q9P0N5 145 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 ADAM21Q9UKJ8 722 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 SNX6Q9UNH7 406 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 EIF3LQ9Y262 564 aaKnown RBP8.09□□□□□ -1.11
RPS3A-206ENST00000507485 TIMM22Q9Y584 194 aa8.09□□□□□ -1.11
RPS3A-206ENST00000507485 POC1B-GALNT4F8VUJ3 575 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms