RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PRR22Q8IZ63 422 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 CSNK1A1LQ8N752 337 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 FRAT1Q92837 279 aaPredicted RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 ART4Q93070 314 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 MCHR2Q969V1 340 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 TMEM80Q96HE8 168 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 SAMD8Q96LT4 415 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 TBC1D10AQ9BXI6 508 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 GPN2Q9H9Y4 310 aaPredicted RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 GDAP2Q9NXN4 497 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 PLA2G4CQ9UP65 541 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 PDE10AQ9Y233 779 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 EIF3LQ9Y262 564 aaKnown RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 NUDCQ9Y266 331 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 ABCC9O60706 1549 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 PDXKO00764 312 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 PPIHO43447 177 aaKnown RBP1.98□□□□□ -2.09
GYPB-207ENST00000506679 SEC22BO75396 215 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 MT-ATP6P00846 226 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 TGFAP01135 160 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 CD55P08174 381 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 BCKDHAP12694 445 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 STMN1P16949 149 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 IL10P22301 178 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 CDH5P33151 784 aaPredicted RBP1.98□□□□□ -2.09
GYPB-207ENST00000506679 HSPA1LP34931 641 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 EMDP50402 254 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 P2RY4P51582 365 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 RND3P61587 244 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 PLOD1Q02809 727 aaPredicted RBP1.98□□□□□ -2.09
GYPB-207ENST00000506679 GABPB1Q06547 395 aaPredicted RBP1.98□□□□□ -2.09
GYPB-207ENST00000506679 WASHC5Q12768 1159 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 OVGP1Q12889 678 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 DPYSQ14117 519 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 UBE2V2Q15819 145 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 DCST2Q5T1A1 773 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 ZNF658Q5TYW1 1059 aaPredicted RBP1.98□□□□□ -2.09
GYPB-207ENST00000506679 RAB12Q6IQ22 244 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 SLC39A4Q6P5W5 647 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 SERPINA9Q86WD7 417 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 BPIFB2Q8N4F0 458 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 HDDC3Q8N4P3 179 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 TECTBQ96PL2 329 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 TMEM237Q96Q45 408 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 TSSK1BQ9BXA7 367 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 KRTAP4-3Q9BYR4 195 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 KAT8Q9H7Z6 458 aaKnown RBP1.98□□□□□ -2.09
GYPB-207ENST00000506679 PDFQ9HBH1 243 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 PLSCR3Q9NRY6 295 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.98□□□□□ -2.09
GYPB-207ENST00000506679 ANKMY1Q9P2S6 941 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 MOSPD1Q9UJG1 213 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 USP16Q9Y5T5 823 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 CUX2O14529 1486 aa1.98□□□□□ -2.09
GYPB-207ENST00000506679 ZSCAN5BA6NJL1 495 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 CABYRO75952 493 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 CCDC192P0DO97 292 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 ETS1P14921 441 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 FUT1P19526 365 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 NF2P35240 595 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 DRD3P35462 400 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 RABIFP47224 123 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 STARP49675 285 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 ATXN3P54252 364 aaPredicted RBP1.97□□□□□ -2.09
GYPB-207ENST00000506679 SLC26A5P58743 744 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 ZNF154Q13106 437 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 KCNJ11Q14654 390 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 TMEM52BQ4KMG9 183 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 PVRIGQ6DKI7 326 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 CXCL17Q6UXB2 119 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 TFAP2EQ6VUC0 442 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 HSD11B1LQ7Z5J1 315 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 IFNEQ86WN2 208 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 MCOLN2Q8IZK6 566 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 ZNF619Q8N2I2 560 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 CADM2Q8N3J6 435 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 CERS5Q8N5B7 392 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 C14orf178Q8N769 122 aaPredicted RBP1.97□□□□□ -2.09
GYPB-207ENST00000506679 BCORP1Q8N888 145 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 ANKRD20A12PQ8NF67 263 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 OR9A4Q8NGU2 314 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 SLC25A38Q96DW6 304 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 MAGEB18Q96M61 343 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 FEM1AQ9BSK4 669 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 COMMD4Q9H0A8 199 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 GLT8D2Q9H1C3 349 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 SLC25A51Q9H1U9 297 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 HSD3B7Q9H2F3 369 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 Q9H3A6 140 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 RPAP3Q9H6T3 665 aaPredicted RBP1.97□□□□□ -2.09
GYPB-207ENST00000506679 PNO1Q9NRX1 252 aaKnown RBP1.97□□□□□ -2.09
GYPB-207ENST00000506679 SOHLH2Q9NX45 425 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 NINJ2Q9NZG7 142 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 SPRR3Q9UBC9 169 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 ABCG2Q9UNQ0 655 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 FOXJ3Q9UPW0 622 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 GTF3C1Q12789 2109 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 PARD3Q8TEW0 1356 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 TNRQ92752 1358 aa1.97□□□□□ -2.09
GYPB-207ENST00000506679 RNF103-CHMP3A0A140T963 221 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms