RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TOR1AIP1Q5JTV8 583 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 LIPKQ5VXJ0 399 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 ISLR2Q6UXK2 745 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 TMEM26Q6ZUK4 368 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 LMNTD2Q8IXW0 634 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 Q8N377 158 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 MRPL43Q8N983 215 aaKnown RBP4.79□□□□□ -1.64
HERC4-213ENST00000506515 TMEM37Q8WXS4 190 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 ACCSQ96QU6 501 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 NLNQ9BYT8 704 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 PUS3Q9BZE2 481 aaKnown RBP4.79□□□□□ -1.64
HERC4-213ENST00000506515 PORCNQ9H237 461 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 RAI14Q9P0K7 980 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 PAK5Q9P286 719 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 LHX3Q9UBR4 397 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 ATG4BQ9Y4P1 393 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 TDRD15B5MCY1 1934 aaKnown RBP4.79□□□□□ -1.64
HERC4-213ENST00000506515 MYH2Q9UKX2 1941 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 ZSWIM8A7E2V4 1837 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 PTPRFP10586 1907 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 PTPRZ1P23471 2315 aaPredicted RBP4.78□□□□□ -1.64
HERC4-213ENST00000506515 A0A1B0GU03 582 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 PI15O43692 258 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 LMO2P25791 158 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 TMOD1P28289 359 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
HERC4-213ENST00000506515 NDST1P52848 882 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 ACLYP53396 1101 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 MECOMQ03112 1051 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 KARSQ15046 597 aaKnown RBP4.78□□□□□ -1.64
HERC4-213ENST00000506515 HKDC1Q2TB90 917 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 AGAP7PQ5VUJ5 663 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 CWC27Q6UX04 472 aaKnown RBP4.78□□□□□ -1.64
HERC4-213ENST00000506515 MLKLQ8NB16 471 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 ZNF485Q8NCK3 441 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 SPATA3Q8NHX4 192 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 HSD17B14Q9BPX1 270 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 IL1RL2Q9HB29 575 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 IKZF3Q9UKT9 509 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 KLHDC2Q9Y2U9 406 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 ZNF175Q9Y473 711 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 CPQQ9Y646 472 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 RLFQ13129 1914 aa4.78□□□□□ -1.64
HERC4-213ENST00000506515 DOCK1Q14185 1865 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 XIRP2A4UGR9 3374 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 ARPC1BO15143 372 aaKnown RBP4.77□□□□□ -1.65
HERC4-213ENST00000506515 ADAM12O43184 909 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 SSX5O60225 188 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 UBTFL1P0CB47 393 aaPredicted RBP4.77□□□□□ -1.65
HERC4-213ENST00000506515 CCNA2P20248 432 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 IL10P22301 178 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 GSK3BP49841 420 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 SLC26A5P58743 744 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 BPIFB3P59826 476 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 AGKQ53H12 422 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 WDR25Q64LD2 544 aaPredicted RBP4.77□□□□□ -1.65
HERC4-213ENST00000506515 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 TIPARPQ7Z3E1 657 aaKnown RBP4.77□□□□□ -1.65
HERC4-213ENST00000506515 LUZP1Q86V48 1076 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 C4orf32Q8N8J7 132 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 COLGALT1Q8NBJ5 622 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 MAPK1IP1LQ8NDC0 245 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 OR4Q3Q8NH05 313 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 TAF15Q92804 592 aaKnown RBP eCLIP4.77□□□□□ -1.65
HERC4-213ENST00000506515 SAMD8Q96LT4 415 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 SOSTQ9BQB4 213 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 HSD3B7Q9H2F3 369 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 ADNPQ9H2P0 1102 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 TMEM231Q9H6L2 316 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 Q9HAA7 133 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 ELL3Q9HB65 397 aaPredicted RBP4.77□□□□□ -1.65
HERC4-213ENST00000506515 CNOT2Q9NZN8 540 aaKnown RBP4.77□□□□□ -1.65
HERC4-213ENST00000506515 MIOXQ9UGB7 285 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 TUBGCP4Q9UGJ1 667 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 TBX21Q9UL17 535 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 FER1L5A0AVI2 2057 aa4.77□□□□□ -1.65
HERC4-213ENST00000506515 MYH13Q9UKX3 1938 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 BCLAF3A2AJT9 711 aaKnown RBP4.76□□□□□ -1.65
HERC4-213ENST00000506515 RNF212BA8MTL3 300 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 SHISA9B4DS77 424 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 CFLARO15519 480 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 TXNL1O43396 289 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 CCDC159P0C7I6 412 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 CYP11B1P15538 503 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 RPA1P27694 616 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 MATKP42679 507 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 RAG2P55895 527 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 MYBPC1Q00872 1141 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 HAGHQ16775 308 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 TMEM44Q2T9K0 475 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 ZNF528Q3MIS6 628 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 LDLRAP1Q5SW96 308 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 C9orf66Q5T8R8 295 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 RHBDD2Q6NTF9 364 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 ZNF841Q6ZN19 808 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 PYROXD2Q8N2H3 581 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 RAB3CQ96E17 227 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 ATOH8Q96SQ7 321 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 ATG10Q9H0Y0 220 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms