RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZNF524Q96C55 264 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 POLR2J2Q9GZM3 115 aaKnown RBP7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 OR8D2Q9GZM6 311 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 POLR2J3Q9H1A7 115 aaKnown RBP7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 PCDHGB3Q9Y5G1 929 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 SMG1Q96Q15 3661 aaKnown RBP7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 MFN2O95140 757 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 OXSR1O95747 527 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 TSPAN19P0C672 248 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 GGT1P19440 569 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PRSS58Q8IYP2 241 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 CLEC4FQ8N1N0 589 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PCYOX1LQ8NBM8 494 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 SLX1AQ9BQ83 275 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 DEFB126Q9BYW3 111 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 GID8Q9NWU2 228 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 NDE1Q9NXR1 346 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 TAS2R1Q9NYW7 299 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ABI3Q9P2A4 366 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ICAM5Q9UMF0 924 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 NUP214P35658 2090 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PINLYPA6NC86 204 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 SYT5O00445 386 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 EVI2BP34910 448 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 DSTNP60981 165 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 POU6F2P78424 691 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 COL9A2Q14055 689 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 RPS6KA2Q15349 733 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ERICH5Q6P6B1 374 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 SH3GL1Q99961 368 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ACKR4Q9NPB9 350 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 DDX18Q9NVP1 670 aaKnown RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 DSPP15924 2871 aaKnown RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 CNOT1A5YKK6 2376 aaKnown RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 CENPVL1A0A0U1RR11 272 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 NDUFAB1O14561 156 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 IFNA16P05015 189 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PABPC4LP0CB38 370 aaKnown RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ETFAP13804 333 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PGDP52209 483 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 NRF1Q16656 503 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 ADGRE4PQ86SQ3 457 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PAPD5Q8NDF8 572 aaKnown RBP7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 OR5D16Q8NGK9 328 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 TMBIM1Q969X1 311 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 YIPF2Q9BWQ6 316 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 C12orf10Q9HB07 376 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 TP53TG5Q9Y2B4 290 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 C15orf41Q9Y2V0 281 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 CSAG2Q9Y5P2 127 aa7.58□□□□□ -1.2
CDC42SE2-208ENST00000505065 PRAMEF25A6NGN4 478 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ANGPT2O15123 496 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 FMO6PO60774 539 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ATP5HO75947 161 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 UBOX5O94941 541 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 SNX4O95219 450 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 NUDT7P0C024 238 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ATP12AP54707 1039 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 MAPK14Q16539 360 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 RBM15BQ8NDT2 890 aaKnown RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF426Q9BUY5 554 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF703Q9H7S9 590 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 Q9N2J8 555 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 DNAJB12Q9NXW2 375 aaKnown RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 P2RX2Q9UBL9 471 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 DTNAQ9Y4J8 743 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 UBR5O95071 2799 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 PRORSD1PA6NEY8 169 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 A8MUA0 341 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ICOSLGO75144 302 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 CCL3P10147 92 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 PRKAR1AP10644 381 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF17P17021 662 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ENDOUP21128 410 aaKnown RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 MST1P26927 711 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 MAGEA2P43356 314 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 PSMD4P55036 377 aaKnown RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 GFRA1P56159 465 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF169Q14929 603 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF239Q16600 458 aaKnown RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 VMACQ2NL98 169 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 LCN8Q6JVE9 175 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 C16orf47Q6ZP98 133 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 FGD2Q7Z6J4 655 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF605Q86T29 641 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 SLC44A2Q8IWA5 706 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 LSMEM1Q8N8F7 131 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 ANKFN1Q8N957 763 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 BHLHE22Q8NFJ8 381 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 OR2M3Q8NG83 312 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 OR10G3Q8NGC4 313 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 PIK3R3Q92569 461 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 EXTL1Q92935 676 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 MMADHCQ9H3L0 296 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 MTHFD2LQ9H903 347 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 CALML5Q9NZT1 146 aa7.57□□□□□ -1.2
CDC42SE2-208ENST00000505065 A0A0G2JMM0 328 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms