RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 NHSL2Q5HYW2 709 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 AP1ARQ63HQ0 302 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 OR4F3Q6IEY1 312 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ANKRD26P1Q6NSI1 321 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 FAM180BQ6P0A1 224 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 C16orf47Q6ZP98 133 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 TRILQ7L0X0 811 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 CHMP1BQ7LBR1 199 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 TMEM251Q8N6I4 163 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 KRTCAP2Q8N6L1 136 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 OR4K17Q8NGC6 315 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 OR5M3Q8NGP4 307 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 NEIL3Q8TAT5 605 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 FAM110BQ8TC76 370 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 NEURL3Q96EH8 262 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 SLC35G5Q96KT7 338 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 HES7Q9BYE0 225 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF703Q9H7S9 590 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF395Q9H8N7 513 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 C15orf41Q9Y2V0 281 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 CFAP46Q8IYW2 2715 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 RNF103-CHMP3A0A140T963 221 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CLEC18AA5D8T8 446 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CCDC154A6NI56 674 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 EVPLLA8MZ36 301 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CCL21O00585 134 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 SLC22A2O15244 555 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 LRRTM2O43300 516 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 KCNK2O95069 426 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CPSF4O95639 269 aaKnown RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 NPPAP01160 153 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 TPOP07202 933 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 PEPDP12955 493 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 UQCRBP14927 111 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 MST1P26927 711 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 IDH3AP50213 366 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CDK9P50750 372 aaKnown RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 SUMO3P55854 103 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 FADDQ13158 208 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 RCAN2Q14206 197 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ARHGAP11BQ3KRB8 267 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 PRR30Q53SZ7 412 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 SPANXN4Q5MJ08 99 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 PDSS1Q5T2R2 415 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 PRAMEF20Q5VT98 475 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CES4AQ5XG92 561 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CLEC18BQ6UXF7 455 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ANGPTL8Q6UXH0 198 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF621Q6ZSS3 439 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 C16orf62Q7Z3J2 963 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 IFNEQ86WN2 208 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 PRR22Q8IZ63 422 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF808Q8N4W9 903 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CLEC18CQ8NCF0 446 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CHDHQ8NE62 594 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 TOR1AIP2Q8NFQ8 470 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 RNF138Q8WVD3 245 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 GIMAP5Q96F15 307 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 RMND5BQ96G75 393 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ZFP3Q96NJ6 502 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 SMG1Q96Q15 3661 aaKnown RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 SH3GL1Q99961 368 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 PIGQQ9BRB3 760 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 NMUR2Q9GZQ4 415 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 DEFB127Q9H1M4 99 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 EVA1AQ9H8M9 152 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 CHST11Q9NPF2 352 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 EQTNQ9NQ60 294 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 SIRT3Q9NTG7 399 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 DEPPQ9NTK1 212 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 ERRFI1Q9UJM3 462 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-220ENST00000505005 DTX4Q9Y2E6 619 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 BSNQ9UPA5 3926 aa9.01□□□□□ -0.97
NR1I3-220ENST00000505005 NBASA2RRP1 2371 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 IGLV3-32A0A0A0MS00 114 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 A0A1B0GTH9 108 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 WIPF3A6NGB9 483 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 GJE1A6NN92 205 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 FAM166BA8MTA8 275 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 GTPBP1O00178 669 aaKnown RBP9□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF195O14628 629 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 FADS1O60427 444 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 EIF4E2O60573 245 aaKnown RBP9□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF354AO60765 605 aaPredicted RBP9□□□□□ -0.97
NR1I3-220ENST00000505005 UTS2O95399 124 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 ALDOCP09972 364 aaKnown RBP9□□□□□ -0.97
NR1I3-220ENST00000505005 CYP4B1P13584 511 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 ADH6P28332 368 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 SOX18P35713 384 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 ADH7P40394 386 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 MAGEA5P43359 124 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF41P51814 821 aaPredicted RBP9□□□□□ -0.97
NR1I3-220ENST00000505005 MAP2K6P52564 334 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 ARFIP2P53365 341 aa9□□□□□ -0.97
NR1I3-220ENST00000505005 ATP12AP54707 1039 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms