RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SNRPGP62308 76 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 LASP1Q14847 261 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF630Q2M218 657 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 IGSF11Q5DX21 431 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TMEM255AQ5JRV8 349 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 C6orf132Q5T0Z8 1188 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF697Q5TEC3 545 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 C3P1Q6ZMU1 363 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TRAPPC5Q8IUR0 188 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FAM181AQ8N9Y4 354 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CHST14Q8NCH0 376 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 C2CD4CQ8TF44 421 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 THAP4Q8WY91 577 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.16□□□□□ -1.269e-6■■□□□ 13.2
NEDD9-208ENST00000504387 GPBP1L1Q9HC44 474 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TAAR2Q9P1P5 351 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 B4GALT6Q9UBX8 382 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 hCG_1807616A0A1W2PRN6 198 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 A0A1W2PS29 197 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 E9PQ18 207 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 KPNA3O00505 521 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 RNASET2O00584 256 aaKnown RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 PI15O43692 258 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 GPR37L1O60883 481 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 OR5F1O95221 314 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 EOMESO95936 686 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 RB1P06400 928 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 ACP5P13686 325 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 APEHP13798 732 aaKnown RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 NPR2P20594 1047 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 CFL1P23528 166 aaKnown RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 ATP5A1P25705 553 aaKnown RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 RAD52P43351 418 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 TBPL1P62380 186 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 RING1Q06587 406 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 ATXN7L3Q14CW9 347 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 LRRC37A5PQ49AS3 106 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 CDKL4Q5MAI5 379 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 C12orf73Q69YU5 71 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 SLC27A4Q6P1M0 643 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 DGLUCYQ7Z3D6 616 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 SIRT6Q8N6T7 355 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 AMER3Q8N944 861 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 FBXO15Q8NCQ5 510 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 OR52H1Q8NGJ2 320 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 RPLP0P6Q8NHW5 317 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 LRIG1Q96JA1 1093 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 ERMAPQ96PL5 475 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 DMRTA2Q96SC8 542 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 TMEM168Q9H0V1 697 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 RDH14Q9HBH5 336 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 WASH6PQ9NQA3 447 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 MARCH5Q9NX47 278 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 ENOPH1Q9UHY7 261 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 FBXL4Q9UKA2 621 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 OR10H1Q9Y4A9 318 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 YIPF1Q9Y548 306 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 SCN3AQ9NY46 2000 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 FNDC1Q4ZHG4 1894 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-208ENST00000504387 PATJQ8NI35 1801 aa7.15□□□□□ -1.26
NEDD9-208ENST00000504387 ANXA2P2A6NMY6 339 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF593O00488 134 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 GNB5O14775 395 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 B4GALT2O60909 372 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 RLN1P04808 185 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 C8GP07360 202 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 ACP2P11117 423 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 PIPP12273 146 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 HOXB6P17509 224 aaKnown RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 CXCL2P19875 107 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 PAICSP22234 425 aaKnown RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 IMPA1P29218 277 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 LIMS1P48059 325 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 GBX2P52951 348 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 LMAN2Q12907 356 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 COL28A1Q2UY09 1125 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 HDDC2Q7Z4H3 204 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 UBE2Q1Q7Z7E8 422 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 LIX1LQ8IVB5 337 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 MEIOBQ8N635 442 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM99Q8N816 258 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 UBTD2Q8WUN7 234 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 CHTF18Q8WVB6 975 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 COL26A1Q96A83 441 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 ZSWIM3Q96MP5 696 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 KCNJ15Q99712 375 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 ARHGAP9Q9BRR9 750 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 RIOK2Q9BVS4 552 aaKnown RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 FKRPQ9H9S5 495 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 ZSCAN32Q9NX65 697 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 TEX10Q9NXF1 929 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 TNFRSF10DQ9UBN6 386 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 KLK11Q9UBX7 282 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 TESQ9UGI8 421 aaKnown RBP7.15□□□□□ -1.27
NEDD9-208ENST00000504387 GPR160Q9UJ42 338 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 SLC45A1Q9Y2W3 748 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 WDR90Q96KV7 1748 aa7.15□□□□□ -1.27
NEDD9-208ENST00000504387 A0A087WUU8 490 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 FAAHO00519 579 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms