RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MIF4GDA9UHW6 222 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 SHISA9B4DS77 424 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 EIF3FO00303 357 aaPredicted RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 ABCD4O14678 606 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TNFSF11O14788 317 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PGRMC2O15173 223 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TAPBPO15533 448 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PHGDHO43175 533 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 EMC8O43402 210 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CXCL13O43927 109 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 H2AFYO75367 372 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 ERAL1O75616 437 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 REM1O75628 298 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ZNF189O75820 626 aaPredicted RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 LYZL6O75951 148 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 KRT14P02533 472 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 AHSGP02765 367 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PEPDP12955 493 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 APEHP13798 732 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 GNAZP19086 355 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CHMP24386 653 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 EDNRAP25101 427 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 SHC1P29353 583 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 IL12BP29460 328 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 AGTR1P30556 359 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 IL2RGP31785 369 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CXCR5P32302 372 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 FEN1P39748 380 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 ZNF83P51522 516 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CTBP2P56545 445 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 RPS26P62854 115 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 RPP38P78345 283 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 HMGCS1Q01581 520 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 IRF8Q02556 426 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TGM3Q08188 693 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 FUT7Q11130 342 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TBL3Q12788 808 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 ZNF155Q12901 538 aaPredicted RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 TBX2Q13207 712 aaPredicted RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 CHIT1Q13231 466 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CCNIQ14094 377 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 GUSBP1Q15486 140 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 OR4D1Q15615 310 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TAB1Q15750 504 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ETFDHQ16134 617 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 SGCBQ16585 318 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PDK4Q16654 411 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 AP5B1Q2VPB7 878 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 NCMAPQ5T1S8 102 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 LIPNQ5VXI9 398 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 OR2A2Q6IF42 318 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 FAM45BPQ6NSW5 357 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TTC27Q6P3X3 843 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 NPSR1Q6W5P4 371 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 SH2D5Q6ZV89 423 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 GPR180Q86V85 440 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PLCZ1Q86YW0 608 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 IGDCC3Q8IVU1 814 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 DND1Q8IYX4 353 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 C3orf56Q8N813 242 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ZNF615Q8N8J6 731 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 SEMA6DQ8NFY4 1073 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TTLQ8NG68 377 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 OR52R1Q8NGF1 315 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 FAM45AQ8TCE6 357 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ZNF473Q8WTR7 871 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 ABHD3Q8WU67 409 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 SLC9A6Q92581 669 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TAF15Q92804 592 aaKnown RBP eCLIP3.22□□□□□ -1.89
USP46-205ENST00000504078 CAVIN3Q969G5 261 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 RHBDF1Q96CC6 855 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PTCD3Q96EY7 689 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 RBM18Q96H35 190 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 HES6Q96HZ4 224 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 VPS39Q96JC1 886 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ADOQ96SZ5 270 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ASPNQ9BXN1 380 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 RTN4RQ9BZR6 473 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TSGA10Q9BZW7 698 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 TRIM2Q9C040 744 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 STMN4Q9H169 189 aaPredicted RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 OR10A5Q9H207 317 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 DSN1Q9H410 356 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 NARFLQ9H6Q4 476 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ESRP2Q9H6T0 727 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 CAB39LQ9H9S4 337 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 RNF122Q9H9V4 155 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CXorf21Q9HAI6 301 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CLK4Q9HAZ1 481 aaKnown RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 PLAC1Q9HBJ0 212 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 BARX1Q9HBU1 254 aaPredicted RBP3.22□□□□□ -1.89
USP46-205ENST00000504078 LPAR2Q9HBW0 351 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PFDN4Q9NQP4 134 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 ELOVL5Q9NYP7 299 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 MED11Q9P086 117 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PPP4R1LQ9P1A2 415 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 XPR1Q9UBH6 696 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 CTNNAL1Q9UBT7 734 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 PHF11Q9UIL8 331 aa3.22□□□□□ -1.89
USP46-205ENST00000504078 POU2F3Q9UKI9 436 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms