RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SNX13Q9Y5W8 968 aa18.79■□□□□ 0.6
CDC42SE2-206ENST00000503291 M0QX08 132 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 ACOT8O14734 319 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 ARPC2O15144 300 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 PPM1BO75688 479 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 KDELR2P33947 212 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 SOX3P41225 446 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 SSR4P51571 173 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 PNLIPRP2P54317 469 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 ABHD17BQ5VST6 288 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 BBS10Q8TAM1 723 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 QRSL1Q9H0R6 528 aaKnown RBP18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 GPR83Q9NYM4 423 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 ACTR3BQ9P1U1 418 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 DSPPQ9NZW4 1301 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 TMEM8BA6NDV4 472 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 OR6C70A6NIJ9 312 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 UGT2B11O75310 529 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 GUSBP08236 651 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 TRAP1Q12931 704 aaKnown RBP18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 FLYWCH1Q4VC44 716 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 CRB2Q5IJ48 1285 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 AGAP7PQ5VUJ5 663 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 OPN5Q6U736 354 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 CCDC80Q76M96 950 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 HMGN2P46Q86SG4 172 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 ZNF619Q8N2I2 560 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 TMEM156Q8N614 296 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 ASB15Q8WXK1 588 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 COL21A1Q96P44 957 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 AGAP4Q96P64 663 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 GORASP2Q9H8Y8 452 aa18.78■□□□□ 0.6
CDC42SE2-206ENST00000503291 NPIPA5A0A0B4J1W7 369 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 CFAP73A6NFT4 308 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 NPIPA7E9PJI5 369 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 OR6B1O95007 311 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 FBXO45P0C2W1 286 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 NPIPA8P0DM63 369 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 ETS2P15036 469 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 TMED10P49755 219 aaKnown RBP18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 FBXW4P57775 412 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 DHFR2Q86XF0 187 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 BEST3Q8N1M1 668 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 FDCSPQ8NFU4 85 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 OR5M3Q8NGP4 307 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 OR4C3Q8NH37 302 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 APOBEC4Q8WW27 367 aaKnown RBP18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 SPACA9Q96E40 222 aaPredicted RBP18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 MUC13Q9H3R2 512 aa18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 ZNF552Q9H707 407 aaPredicted RBP18.77■□□□□ 0.6
CDC42SE2-206ENST00000503291 KIAA0513O60268 411 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 ABCB7O75027 752 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 CRYBA2P53672 197 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF791Q3KP31 576 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 LRRC23Q53EV4 343 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF468Q5VIY5 522 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 IL20RBQ6UXL0 311 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 CYP2R1Q6VVX0 501 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 PATL1Q86TB9 770 aaKnown RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 KRT73Q86Y46 540 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 FAM162AQ96A26 154 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF607Q96SK3 696 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 KCNE5Q9UJ90 142 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 GPC6Q9Y625 555 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 MGAQ8IWI9 3026 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 PDE9AO76083 593 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 CYP4B1P13584 511 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 NTRK2Q16620 822 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 ISLR2Q6UXK2 745 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 LINC00696Q6ZRV3 163 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 SPPL2CQ8IUH8 684 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 KDF1Q8NAX2 398 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 PMM1Q92871 262 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 RYDENQ9NUL5 291 aaKnown RBP18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 ANKRD10Q9NXR5 420 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 FLRT3Q9NZU0 649 aa18.76■□□□□ 0.59
CDC42SE2-206ENST00000503291 AGAP5A6NIR3 686 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 HS6ST1O60243 411 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 SERPINB7O75635 380 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 UGT2B17O75795 530 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 CIB2O75838 187 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 UTS2O95399 124 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 LCN1P31025 176 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 ATP12AP54707 1039 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 POLE2P56282 527 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 EFR3AQ14156 821 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 FLOT2Q14254 428 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 MAPK14Q16539 360 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 C1orf146Q5VVC0 180 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 NUP54Q7Z3B4 507 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 SPPL2AQ8TCT8 520 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 NSMCE2Q96MF7 247 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 UBQLN4Q9NRR5 601 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 PCDHGA10Q9Y5H3 936 aa18.75■□□□□ 0.59
CDC42SE2-206ENST00000503291 CENPVL1A0A0U1RR11 272 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 NPIPB9F8W1W9 429 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 ICOSLGO75144 302 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 CEACAM4O75871 244 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 MFN2O95140 757 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 STAMBPO95630 424 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms