RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 RSPO3Q9BXY4 272 aaPredicted RBP4.86□□□□□ -1.63
CLDND1-208ENST00000503004 ZCCHC2Q9C0B9 1178 aaKnown RBP4.86□□□□□ -1.63
CLDND1-208ENST00000503004 BHLHE41Q9C0J9 482 aaPredicted RBP4.86□□□□□ -1.63
CLDND1-208ENST00000503004 C11orf49Q9H6J7 331 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 FBRSQ9HAH7 460 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 MIEF1Q9NQG6 463 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 SLC22A11Q9NSA0 550 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 GPR83Q9NYM4 423 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 TAS2R16Q9NYV7 291 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 TAAR2Q9P1P5 351 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 MIOXQ9UGB7 285 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 PCDHGA5Q9Y5G8 931 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 PCDHGA1Q9Y5H4 931 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 CLCA3PQ9Y6N3 262 aa4.86□□□□□ -1.63
CLDND1-208ENST00000503004 HEATR5BQ9P2D3 2071 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 TRBV23OR9-2A0A075B6M9 112 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 A0A1W2PQ09 198 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 H7BY64 318 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 FOXE1O00358 373 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PLPP1O14494 284 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SCAMP1O15126 338 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ADAMDEC1O15204 470 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SIGLEC6O43699 453 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 VEGFDO43915 354 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 RFPL3O75679 317 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PAPLNO95428 1278 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 CFDP00746 253 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 TPOP07202 933 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SRPRAP08240 638 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PRF1P14222 555 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 RAC2P15153 192 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 HOXB6P17509 224 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 NDUFB7P17568 137 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PPIBP23284 216 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ACADLP28330 430 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ETV6P41212 452 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 GSTM5P46439 218 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 CXCR4P61073 352 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 RPP30P78346 268 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ZNF234Q14588 700 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 HNRNPA1L2Q32P51 320 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 UAP1L1Q3KQV9 507 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 AARDQ4LEZ3 155 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 HSD17B12Q53GQ0 312 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PRAMEF14Q5SWL7 426 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 GCNT6Q5T4J0 391 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PRAMEF13Q5VWM6 474 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 HIST2H2AA3Q6FI13 130 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 FAM71E1Q6IPT2 247 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 CEACAM20Q6UY09 585 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 RBMS3Q6XE24 437 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 HMGN2P46Q86SG4 172 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ETFBKMTQ8IXQ9 262 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ADGRF3Q8IZF5 1079 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 OR52N2Q8NGI0 321 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SETD6Q8TBK2 473 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SETD7Q8WTS6 366 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 NSMAFQ92636 917 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 TFGQ92734 400 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 RAB8BQ92930 207 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 BADQ92934 168 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 UCN3Q969E3 161 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 POP5Q969H6 163 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ZNF707Q96C28 371 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 OTUB2Q96DC9 234 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 OTUB1Q96FW1 271 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PRAP1Q96NZ9 151 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 F2RL3Q96RI0 385 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PITX2Q99697 317 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 DPCDQ9BVM2 203 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 OR51M1Q9H341 326 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 CXorf36Q9H7Y0 433 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 IL23AQ9NPF7 189 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 NIT2Q9NQR4 276 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 GLS2Q9UI32 602 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 MKLN1Q9UL63 735 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 CORO2BQ9UQ03 480 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SNX11Q9Y5W9 270 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 MTCL1Q9Y4B5 1905 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 LOC390937A0A1W2PQ73 354 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 TO15178 435 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 SEMA7AO75326 666 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 MPC2O95563 127 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 FGBP02675 491 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PCCBP05166 539 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 EPHX1P07099 455 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ITGB7P26010 798 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 TNFSF8P32971 234 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 FEN1P39748 380 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 WASP42768 502 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 GABREP78334 506 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 HSPB3Q12988 150 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PDE7AQ13946 482 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 ELAVL3Q14576 367 aaKnown RBP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PUM1Q14671 1186 aaKnown RBP eCLIP4.85□□□□□ -1.63
CLDND1-208ENST00000503004 TSC22D1Q15714 1073 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 MICAQ29983 383 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 IFI44LQ53G44 452 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 PABPC1L2AQ5JQF8 200 aa4.85□□□□□ -1.63
CLDND1-208ENST00000503004 VASNQ6EMK4 673 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms