RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ACSM2AQ08AH3 577 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 C2orf54Q08AI8 447 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF763Q0D2J5 394 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 LCP2Q13094 533 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 NNATQ16517 81 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 DECR1Q16698 335 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 GLE1Q53GS7 698 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ACSM2BQ68CK6 577 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 GTF2IRD2BQ6EKJ0 949 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 C8orf74Q6P047 294 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ZCCHC12Q6PEW1 402 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 BEND4Q6ZU67 534 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 PLEKHM3Q6ZWE6 761 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 TRIM46Q7Z4K8 759 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 P4HA3Q7Z4N8 544 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 YTHDF3Q7Z739 585 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 GTF2IRD2Q86UP8 949 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 MISPQ8IVT2 679 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF611Q8N823 705 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 OR7G2Q8NG99 324 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 OR4K17Q8NGC6 315 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 OR9A2Q8NGT5 310 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 C16orf78Q8WTQ4 265 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 NUDT8Q8WV74 236 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 DCAKDQ8WVC6 231 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ZBTB8AQ96BR9 441 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 C1GALT1C1Q96EU7 318 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ADGRG7Q96K78 797 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CCL19Q99731 98 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 SMR3AQ99954 134 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 MED18Q9BUE0 208 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 HDHD5Q9BXW7 423 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 IQCGQ9H095 443 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CDC42EP4Q9H3Q1 356 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CXorf56Q9H5V9 222 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 LRTM1Q9HBL6 345 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 Q9N2J8 555 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 MYNNQ9NPC7 610 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 GIN1Q9NXP7 522 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 PROCRQ9UNN8 238 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 GPR52Q9Y2T5 361 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF337Q9Y3M9 751 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 SNX8Q9Y5X2 465 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 A0A087WUV0 522 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 GNG14A0A1W2PPG7 69 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 C2orf72A6NCS6 295 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 TRIM49D1C9J1S8 452 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 UPK1AO00322 258 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 KLF4O43474 513 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 SMNDC1O75940 238 aaKnown RBP eCLIP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 RSL1D1O76021 490 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 SUPT7LO94864 414 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 NKX2-2O95096 273 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 KCNH1O95259 989 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ANXA4P09525 319 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PABPC4LP0CB38 370 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 CTAGE8P0CG41 777 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ATP5F1P24539 256 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PSMA4P25789 261 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ADH6P28332 368 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 HMOX2P30519 316 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 CASQ1P31415 396 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 CPOXP36551 454 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FRKP42685 505 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ALDH9A1P49189 494 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PTH2RP49190 550 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 RAC1P63000 192 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 MLC1Q15049 377 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PON3Q15166 354 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 POU4F3Q15319 338 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNHIT3Q15649 155 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 LTB4RQ15722 352 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 UAP1Q16222 522 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 VPS26BQ4G0F5 336 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 UNC50Q53HI1 259 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 EXOSC6Q5RKV6 272 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 C1QTNF12Q5T7M4 302 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 RAET1LQ5VY80 246 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM71E1Q6IPT2 247 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 DNM1P46Q6ZS02 220 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 GPRIN3Q6ZVF9 776 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ESPNLQ6ZVH7 1005 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 GGNQ86UU5 652 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 STK32CQ86UX6 486 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PRIMA1Q86XR5 153 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 WDR75Q8IWA0 830 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC44A2Q8IWA5 706 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 CTAGE4Q8IX94 777 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 GTPBP8Q8N3Z3 284 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 MMGT1Q8N4V1 131 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 CDYL2Q8N8U2 506 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 OR4N2Q8NGD1 307 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 OR6Y1Q8NGX8 325 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FNDC9Q8TBE3 224 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM110BQ8TC76 370 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 METTL6Q8TCB7 284 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 TMEM171Q8WVE6 324 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FIG4Q92562 907 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ANP32BQ92688 251 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms