RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 RHBGQ9H310 441 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TNFRSF12AQ9NP84 129 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SLCO1B3Q9NPD5 702 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ACSS1Q9NUB1 689 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 FGFR1OP2Q9NVK5 253 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 RIC8BQ9NVN3 520 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 NMRK1Q9NWW6 199 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SLAMF8Q9P0V8 285 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 MARCOQ9UEW3 520 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 ZFP69BQ9UJL9 534 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ZNF225Q9UK10 706 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ZNF490Q9ULM2 529 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 PLCL2Q9UPR0 1127 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TSC22D4Q9Y3Q8 395 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TIMM22Q9Y584 194 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 USH1CQ9Y6N9 552 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 AP1M2Q9Y6Q5 423 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 NCKAP5O14513 1909 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 LOC105369274A0A096LPK9 316 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 LOC102723532A0A0G2JNH3 316 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 URADA6NGE7 173 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TMEM233B4DJY2 109 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 H0YGG7 62 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 FOXE1O00358 373 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 TXNDC9O14530 226 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 PIP5K1BO14986 540 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 SMAD9O15198 467 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 ZSCAN9O15535 394 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 RGS14O43566 566 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 SSX4O60224 188 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 NRP2O60462 931 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 SRPX2O60687 465 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 CTSVO60911 334 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 SKAP2O75563 359 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 TGDSO95455 350 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 PLAUP00749 431 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TGFAP01135 160 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 PDYNP01213 254 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 EIF2S1P05198 315 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 SLC35G6P0C7Q6 338 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 LINC00032P0C843 101 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 HSD3B1P14060 373 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 RAC2P15153 192 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 DRD4P21917 467 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 USF1P22415 310 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 PTX3P26022 381 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 HSD3B2P26439 372 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TLX1P31314 330 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 GABRA4P48169 554 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 HTR6P50406 440 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 NEK2P51955 445 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 RAP1GDS1P52306 607 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 AGFG1P52594 562 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 SEC24CP53992 1094 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 FOXA1P55317 472 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 ARF3P61204 181 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 STXBP1P61764 594 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 RPS13P62277 151 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 BTKQ06187 659 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 KLC1Q07866 573 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 RGS1Q08116 209 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TGM3Q08188 693 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 CSTF3Q12996 717 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 ABRAXAS2Q15018 415 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 DEFB110Q30KQ9 67 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 UGT3A2Q3SY77 523 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 KLHL22Q53GT1 634 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TOR1AIP1Q5JTV8 583 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TCTE1Q5JU00 501 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TCHHL1Q5QJ38 904 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 FRMPD2BQ6IN97 320 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 H3F3CQ6NXT2 135 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 ZNF704Q6ZNC4 412 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 RNF165Q6ZSG1 346 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 CPLX4Q7Z7G2 160 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 ASPGQ86U10 573 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 GPR135Q8IZ08 494 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 OR4N4Q8N0Y3 316 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 CSNK1A1LQ8N752 337 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 GBP7Q8N8V2 638 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 ANKRD53Q8N9V6 530 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TTC29Q8NA56 475 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 ZFP62Q8NB50 900 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 HUS1BQ8NHY5 278 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 MUC7Q8TAX7 377 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 NT5CQ8TCD5 201 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 ZNF473Q8WTR7 871 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 SLC13A3Q8WWT9 602 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 THOC1Q96FV9 657 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 CMTM7Q96FZ5 175 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 WFIKKN1Q96NZ8 548 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 OR2A5Q96R48 311 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 MTERF1Q99551 399 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 CITED1Q99966 193 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 CENPKQ9BS16 269 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 RBM24Q9BX46 236 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 FAM107BQ9H098 131 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 DEFB127Q9H1M4 99 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 BRF2Q9HAW0 419 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms