RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RTL6Q6ICC9 239 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 ZNF551Q7Z340 670 aaPredicted RBP13.99□□□□□ -0.17
NUP50-219ENST00000497960 CCDC71Q8IV32 467 aaPredicted RBP13.99□□□□□ -0.17
NUP50-219ENST00000497960 MCEMP1Q8IX19 187 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 OR2L13Q8N349 312 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 CIDECQ96AQ7 238 aaPredicted RBP13.99□□□□□ -0.17
NUP50-219ENST00000497960 NTNG2Q96CW9 530 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 ZBED6CLQ96FA7 236 aaPredicted RBP13.99□□□□□ -0.17
NUP50-219ENST00000497960 Q9N2J8 555 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 KCNJ16Q9NPI9 418 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 MRTO4Q9UKD2 239 aaKnown RBP13.99□□□□□ -0.17
NUP50-219ENST00000497960 GPR45Q9Y5Y3 372 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 INTS1Q8N201 2190 aaKnown RBP13.99□□□□□ -0.17
NUP50-219ENST00000497960 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 GMNCA6NCL1 334 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 TTC36A6NLP5 189 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 FAM90A27PA6NNH2 459 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 AHRRA9YTQ3 701 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 C19orf84I3L1E1 186 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 CBR3O75828 277 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 NCF2P19878 526 aaPredicted RBP13.98□□□□□ -0.17
NUP50-219ENST00000497960 ZFP36L2P47974 494 aaKnown RBP13.98□□□□□ -0.17
NUP50-219ENST00000497960 MANFP55145 182 aaKnown RBP13.98□□□□□ -0.17
NUP50-219ENST00000497960 C21orf58P58505 322 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 UFM1P61960 85 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 PSG6Q00889 435 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 CRYZQ08257 329 aaKnown RBP13.98□□□□□ -0.17
NUP50-219ENST00000497960 SQLEQ14534 574 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 SF3B4Q15427 424 aaKnown RBP eCLIP13.98□□□□□ -0.174e-8■■■■■ 40.5
NUP50-219ENST00000497960 DPY19L1Q2PZI1 675 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 PGS1Q32NB8 556 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 EIPR1Q53HC9 387 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 CPTPQ5TA50 214 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 SPATA21Q7Z572 469 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 CPLX4Q7Z7G2 160 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 RIMKLAQ8IXN7 391 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 PM20D2Q8IYS1 436 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 MIER2Q8N344 545 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 OR4N2Q8NGD1 307 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 C10orf82Q8WW14 230 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 EFHD2Q96C19 240 aaPredicted RBP13.98□□□□□ -0.17
NUP50-219ENST00000497960 TIMP4Q99727 224 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 SERHLQ9NQF3 203 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 ZIM2Q9NZV7 527 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 SLC6A5Q9Y345 797 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 WIF1Q9Y5W5 379 aa13.98□□□□□ -0.17
NUP50-219ENST00000497960 C9JVG2 144 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 ANKRD28O15084 1053 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 PSMG1O95456 288 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 LAMP1P11279 417 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 PRF1P14222 555 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 EFNA1P20827 205 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 DRD4P21917 467 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 PSMD4P55036 377 aaKnown RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 DECR1Q16698 335 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 NHSL2Q5HYW2 709 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 WIPI1Q5MNZ9 446 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 VASNQ6EMK4 673 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 GDF7Q7Z4P5 450 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 CAMKMTQ7Z624 323 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 YRDCQ86U90 279 aaKnown RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 PLCZ1Q86YW0 608 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 WDSUB1Q8N9V3 476 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 FAM83FQ8NEG4 500 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 OR14L1PQ8NHC6 308 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 NUDT8Q8WV74 236 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 ABTB1Q969K4 478 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 TESCQ96BS2 214 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 SPOCK3Q9BQ16 436 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 DUSP26Q9BV47 211 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 UCK2Q9BZX2 261 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 BHLHE41Q9C0J9 482 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 SDR39U1Q9NRG7 319 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 ACSS1Q9NUB1 689 aaPredicted RBP13.97□□□□□ -0.17
NUP50-219ENST00000497960 CBLCQ9ULV8 474 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 NBPF19A0A087WUL8 3843 aa13.97□□□□□ -0.17
NUP50-219ENST00000497960 MED12Q93074 2177 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 ABCA12Q86UK0 2595 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 NKX2-6A6NCS4 301 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 SLC22A3O75751 556 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 ACTL6AO96019 429 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 CYP4B1P13584 511 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 BMP7P18075 431 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 GABRA3P34903 492 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 ATP4BP51164 291 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 IRX1P78414 480 aaPredicted RBP13.96□□□□□ -0.17
NUP50-219ENST00000497960 GAB1Q13480 694 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 FAM174BQ3ZCQ3 159 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 VPS26BQ4G0F5 336 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 SPANXN4Q5MJ08 99 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 RIPPLY2Q5TAB7 128 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 OR4F3Q6IEY1 312 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
NUP50-219ENST00000497960 WDR53Q7Z5U6 358 aaPredicted RBP13.96□□□□□ -0.17
NUP50-219ENST00000497960 NATD1Q8N6N6 113 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms