RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 A0A1W2PPC4 97 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 IRGMA1A4Y4 181 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 SNTNA6NMZ2 147 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 PRODHO43272 600 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 KIAA0513O60268 411 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 STX11O75558 287 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 NTN1O95631 604 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 AK1P00568 194 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 THY1P04216 161 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 DBIP07108 87 aaKnown RBP12.16□□□□□ -0.46
GARNL3-220ENST00000496711 STAT5AP42229 794 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 PSMD7P51665 324 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 C1orf61Q13536 156 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 GPR68Q15743 365 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 PRICKLE4Q2TBC4 344 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 TRIM16LQ309B1 348 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 ZCCHC12Q6PEW1 402 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 MBOAT2Q6ZWT7 520 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 KLHDC7BQ96G42 594 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 CDADC1Q9BWV3 514 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 MROQ9BYG7 248 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 SEMA6CQ9H3T2 930 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-220ENST00000496711 TESQ9UGI8 421 aaKnown RBP12.16□□□□□ -0.46
GARNL3-220ENST00000496711 CFL2Q9Y281 166 aa12.16□□□□□ -0.46
GARNL3-220ENST00000496711 B4DGG1 531 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 SGK494L7N484 410 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 PIP5K1CO60331 668 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 ST6GAL1P15907 406 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 TYRP1P17643 537 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 CD40LGP29965 261 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 SOX6P35712 828 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 SOX3P41225 446 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 GPR4P46093 362 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF136P52737 540 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 RPS3AP61247 264 aaKnown RBP12.15□□□□□ -0.46
GARNL3-220ENST00000496711 MLLT1Q03111 559 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-220ENST00000496711 MAP4K2Q12851 820 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 MLLT11Q13015 90 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-220ENST00000496711 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 NIPAL1Q6NVV3 410 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 TUBA3EQ6PEY2 450 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF438Q7Z4V0 828 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 NRMQ8IXM6 262 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 SHISA5Q8N114 240 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 CYP4Z2PQ8N1L4 340 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 C19orf47Q8N9M1 422 aaKnown RBP12.15□□□□□ -0.46
GARNL3-220ENST00000496711 MINDY2Q8NBR6 621 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 OSTF1Q92882 214 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 LRRC61Q9BV99 259 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 POLR2J2Q9GZM3 115 aaKnown RBP12.15□□□□□ -0.46
GARNL3-220ENST00000496711 STARD5Q9NSY2 213 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 SLC7A7Q9UM01 511 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 CLCA2Q9UQC9 943 aa12.15□□□□□ -0.46
GARNL3-220ENST00000496711 KDM4EB2RXH2 506 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 TAF4O00268 1085 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 KLF4O43474 513 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 RDH16O75452 317 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GPX5O75715 221 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 HBQ1P09105 142 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 NID1P14543 1247 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GNSP15586 552 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MYL12AP19105 171 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 CDH3P22223 829 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 S100A5P33763 92 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 PPP5CP53041 499 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 IFITM3Q01628 133 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MGAT2Q10469 447 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 RAB40BQ12829 278 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 EXOSC7Q15024 291 aaKnown RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 OXA1LQ15070 435 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 DEFB110Q30KQ9 67 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MINDY4Q4G0A6 757 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 C3orf38Q5JPI3 329 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 PERM1Q5SV97 790 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 SYT13Q7L8C5 426 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 C11orf74Q86VG3 221 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 POGLUT1Q8NBL1 392 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 OR9Q1Q8NGQ5 310 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GPR151Q8TDV0 419 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 PIK3R3Q92569 461 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 TEX12Q9BXU0 123 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 FAM60AQ9NP50 221 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MRPS18AQ9NVS2 196 aaKnown RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 SEC14L4Q9UDX3 406 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 TP53BP1Q12888 1972 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 THADAQ6YHU6 1953 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 HCRTR1O43613 425 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 CT62P0C5K7 136 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MAP3K8P41279 467 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 POU6F2P78424 691 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF155Q12901 538 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MAPK14Q16539 360 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms