RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TRIM3O75382 744 aaPredicted RBP4.28□□□□□ -1.72
SSR3-208ENST00000496050 STX11O75558 287 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 KBTBD11O94819 623 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 HPP00738 406 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 JCHAINP01591 159 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 FAM200BP0CF97 657 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 PPIAL4GP0DN37 164 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 DRD5P21918 477 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 OTX2P32243 289 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 HMGCLP35914 325 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 CHI3L1P36222 383 aaPredicted RBP4.28□□□□□ -1.72
SSR3-208ENST00000496050 ARHGDIBP52566 201 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 NTHL1P78549 312 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 ZFP36L1Q07352 338 aaKnown RBP4.28□□□□□ -1.72
SSR3-208ENST00000496050 LTB4RQ15722 352 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 LGSNQ5TDP6 509 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 LANCL3Q6ZV70 420 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 CYS1Q717R9 158 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 PPP1R42Q7Z4L9 355 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 HSD11B1LQ7Z5J1 315 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 PARGQ86W56 976 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 ZSCAN4Q8NAM6 433 aaPredicted RBP4.28□□□□□ -1.72
SSR3-208ENST00000496050 OR6T1Q8NGN1 323 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 C4orf36Q96KX1 117 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 CASD1Q96PB1 797 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.28□□□□□ -1.72
SSR3-208ENST00000496050 CUTCQ9NTM9 273 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 ZNF581Q9P0T4 197 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 ARMCX1Q9P291 453 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 PRODH2Q9UF12 536 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 DUSP12Q9UNI6 340 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 MRPS7Q9Y2R9 242 aaKnown RBP4.28□□□□□ -1.72
SSR3-208ENST00000496050 SPACA6W5XKT8 324 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 EFCAB7A8K855 629 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 G3V3Y1 287 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 IGHG3P01860 377 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 CLUP10909 449 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 CAPN2P17655 700 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 HNRNPA2B1P22626 353 aaKnown RBP4.27□□□□□ -1.73
SSR3-208ENST00000496050 IGFBP5P24593 272 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 SLC8A3P57103 927 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 BDH1Q02338 343 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 PLOD1Q02809 727 aaPredicted RBP4.27□□□□□ -1.73
SSR3-208ENST00000496050 IL18R1Q13478 541 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 PDK4Q16654 411 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 CYP51A1Q16850 503 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 FAM74A3Q4VXF1 159 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 CES3Q6UWW8 571 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
SSR3-208ENST00000496050 ANKRD37Q7Z713 158 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 GTSCR1Q86UQ5 136 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 C18orf25Q96B23 403 aaPredicted RBP4.27□□□□□ -1.73
SSR3-208ENST00000496050 TXN2Q99757 166 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 ERP44Q9BS26 406 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 RAB33BQ9H082 229 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 TMEM117Q9H0C3 514 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
SSR3-208ENST00000496050 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 CALHM2Q9HA72 323 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 UTP6Q9NYH9 597 aaKnown RBP4.27□□□□□ -1.73
SSR3-208ENST00000496050 DHRS4-AS1Q9P1J3 65 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 CYTH4Q9UIA0 394 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 OR10H1Q9Y4A9 318 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 METP08581 1390 aa4.27□□□□□ -1.73
SSR3-208ENST00000496050 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 A0A1B0GU03 582 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 PPIAL4DF5H284 164 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 H0YCG3 227 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 GMFGO60234 142 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 UFL1O94874 794 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 HBQ1P09105 142 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 PRG2P13727 222 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 ACADSP16219 412 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 XRCC1P18887 633 aaPredicted RBP4.26□□□□□ -1.73
SSR3-208ENST00000496050 GNPDA1P46926 289 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 CSRP3P50461 194 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 NOVA1P51513 510 aaKnown RBP4.26□□□□□ -1.73
SSR3-208ENST00000496050 PUDPQ08623 228 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 COX10Q12887 443 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 MAPK6Q16659 721 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 ATAD3BQ5T9A4 648 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 OLFML2AQ68BL7 652 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 STAC2Q6ZMT1 411 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 IFNEQ86WN2 208 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 BPIFB2Q8N4F0 458 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 PNPT1Q8TCS8 783 aaKnown RBP4.26□□□□□ -1.73
SSR3-208ENST00000496050 SPRYD4Q8WW59 207 aaPredicted RBP4.26□□□□□ -1.73
SSR3-208ENST00000496050 IL1F10Q8WWZ1 152 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 SDSLQ96GA7 329 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 TTC25Q96NG3 672 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 MCCC1Q96RQ3 725 aaPredicted RBP4.26□□□□□ -1.73
SSR3-208ENST00000496050 HCAR1Q9BXC0 346 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 RHOJQ9H4E5 214 aa4.26□□□□□ -1.73
SSR3-208ENST00000496050 MEPEQ9NQ76 525 aaPredicted RBP4.26□□□□□ -1.73
SSR3-208ENST00000496050 CLEC5AQ9NY25 188 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms