RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CUTCQ9NTM9 273 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 TXLNGQ9NUQ3 528 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ARL8BQ9NVJ2 186 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 PSD3Q9NYI0 1048 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 HAO2Q9NYQ3 351 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 COQ3Q9NZJ6 369 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 SLC2A6Q9UGQ3 507 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 CIDEBQ9UHD4 219 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 SH3BGRL2Q9UJC5 107 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 NXT1Q9UKK6 140 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 PLCL2Q9UPR0 1127 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 RUVBL2Q9Y230 463 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 ASF1AQ9Y294 204 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 PLEKHA6Q9Y2H5 1048 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 R3HDM2Q9Y2K5 976 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 TCAF1Q9Y4C2 921 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 LIPGQ9Y5X9 500 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 POMT1Q9Y6A1 747 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 EPN1Q9Y6I3 576 aaPredicted RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 A3GALT2U3KPV4 340 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.94□□□□□ -1.787e-13■■■■■ 48.1
VPS52-222ENST00000495981 HEATR5BQ9P2D3 2071 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 EPPK1P58107 5090 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 IGHV1-45A0A0A0MS14 117 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 TRAV34A0A0B4J273 112 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 TRGV8A0A0C4DH27 118 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 C1orf226A1L170 272 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 GRID2IPA4D2P6 1211 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 OR6C76A6NM76 312 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 H7C0C1 242 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 RASGRF2O14827 1237 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 MGST3O14880 152 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 OGG1O15527 345 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 P2RX6O15547 441 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 JRKO75564 520 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 SLC22A3O75751 556 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CD63P08962 238 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CD9P21926 228 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 MSNP26038 577 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 CTNNA2P26232 953 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 NSG1P42857 185 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CA7P43166 264 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ATP5OP48047 213 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ALDH3A2P51648 485 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 EIF3EP60228 445 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 BLOC1S1P78537 153 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 MRPS35P82673 323 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 DGCR2P98153 550 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 HOXA4Q00056 320 aaPredicted RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 PMP22Q01453 160 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 KLC1Q07866 573 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 KRT33BQ14525 404 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ZNF273Q14593 569 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 RBBP7Q16576 425 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 C2orf68Q2NKX9 166 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 TYSND1Q2T9J0 566 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CCSMST1Q4G0I0 132 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 KRTCAP3Q53RY4 240 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ESCO2Q56NI9 601 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 DNAJC21Q5F1R6 531 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 FNDC7Q5VTL7 733 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 AGAP7PQ5VUJ5 663 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 FRMPD2BQ6IN97 320 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 AFTPHQ6ULP2 937 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ISLR2Q6UXK2 745 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 UNC5DQ6UXZ4 953 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 Q6YL49 198 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 LCNL1Q6ZST4 164 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 TTLL10Q6ZVT0 673 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 SLC29A4Q7RTT9 530 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CCDC25Q86WR0 208 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CCDC50Q8IVM0 306 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CHERPQ8IWX8 916 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 BCORP1Q8N888 145 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 FAM47BQ8NA70 645 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CATSPER1Q8NEC5 780 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 OR2L3Q8NG85 312 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 OR2L8Q8NGY9 312 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CFAP61Q8NHU2 1237 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 HMGCLL1Q8TB92 370 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 GRK7Q8WTQ7 553 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 LPGAT1Q92604 370 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CORO2AQ92828 525 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 C8orf44Q96CB5 159 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 RRNAD1Q96FB5 475 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 CDKN2AIPNLQ96HQ2 116 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 RITA1Q96K30 269 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CNDP1Q96KN2 507 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ZNF778Q96MU6 729 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 AGAP4Q96P64 663 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 PPP1R2P1Q96PQ5 205 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 CDRT15Q96T59 188 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 SELENOSQ9BQE4 189 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 OSBPL8Q9BZF1 889 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 SLC7A5P2Q9GIP4 190 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 LRRC40Q9H9A6 602 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 ZNF160Q9HCG1 818 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 SMARCAL1Q9NZC9 954 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms