RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 NFU1Q9UMS0 254 aa15.74■□□□□ 0.11
TMEM53-209ENST00000495630 GPR52Q9Y2T5 361 aa15.74■□□□□ 0.11
TMEM53-209ENST00000495630 HEATR5AQ86XA9 2040 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 A0A087WV62 115 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 UQCRHLA0A096LP55 91 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 COQ9O75208 318 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 PLGP00747 810 aaPredicted RBP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 IFNA2P01563 188 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 KRT6AP02538 564 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 KRT6BP04259 564 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 IDUAP35475 653 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 KRT6CP48668 564 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 CTBP2P56545 445 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 RPS4XP62701 263 aaKnown RBP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 C17orf67Q0P5P2 114 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 TRADDQ15628 312 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 DECR1Q16698 335 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 TMEM44Q2T9K0 475 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 HMBOX1Q6NT76 420 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 ADAM5Q6NVV9 412 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 PODNL1Q6PEZ8 512 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 RPS27LQ71UM5 84 aaKnown RBP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 TRMT61AQ96FX7 289 aaKnown RBP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 MRPL57Q9BQC6 102 aaKnown RBP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 C1QTNF3Q9BXJ4 246 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 RTN4RQ9BZR6 473 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 KCNF1Q9H3M0 494 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 GLRX2Q9NS18 164 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 SENP1Q9P0U3 644 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 XPR1Q9UBH6 696 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 MRTO4Q9UKD2 239 aaKnown RBP15.73■□□□□ 0.11
TMEM53-209ENST00000495630 LAMP3Q9UQV4 416 aa15.73■□□□□ 0.11
TMEM53-209ENST00000495630 SONP18583 2426 aaKnown RBP15.72■□□□□ 0.11
TMEM53-209ENST00000495630 GNG14A0A1W2PPG7 69 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 RNF212BA8MTL3 300 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 RNF223E7ERA6 249 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 OVOL3O00110 214 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 MANBAO00462 879 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 PCDH7O60245 1069 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 SS18L1O75177 396 aaPredicted RBP15.72■□□□□ 0.11
TMEM53-209ENST00000495630 OR4F21O95013 312 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 NID1P14543 1247 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 TSPAN8P19075 237 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 HSD17B3P37058 310 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 MAGEA12P43365 314 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 SLC6A8P48029 635 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 RAE1P78406 368 aaKnown RBP15.72■□□□□ 0.11
TMEM53-209ENST00000495630 CSTF3Q12996 717 aaKnown RBP15.72■□□□□ 0.11
TMEM53-209ENST00000495630 STX5Q13190 355 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 SH2D4BQ5SQS7 431 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 MARCH3Q86UD3 253 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 GGNQ86UU5 652 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 WFDC8Q8IUA0 241 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 C16orf78Q8WTQ4 265 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 AKAP1Q92667 903 aaKnown RBP eCLIP15.72■□□□□ 0.11
TMEM53-209ENST00000495630 BBS4Q96RK4 519 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 HBEGFQ99075 208 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 REG4Q9BYZ8 158 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 FLRT3Q9NZU0 649 aa15.72■□□□□ 0.11
TMEM53-209ENST00000495630 C19orf53Q9UNZ5 99 aaPredicted RBP15.72■□□□□ 0.11
TMEM53-209ENST00000495630 IGLV3-32A0A0A0MS00 114 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 MYO1GB0I1T2 1018 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 TLX2O43763 284 aaPredicted RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 ULK1O75385 1050 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 SLITRK5O94991 958 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 IL33O95760 270 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 TP53P04637 393 aaPredicted RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 CHN1P15882 459 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 PSMB1P20618 241 aaKnown RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 PHBP35232 272 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 GSTM5P46439 218 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 EIF1AXP47813 144 aaKnown RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 PSMD4P55036 377 aaKnown RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 CLCQ05315 142 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 ZNF155Q12901 538 aaPredicted RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 VEZF1Q14119 521 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 SPIN4Q56A73 249 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 STK32CQ86UX6 486 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 HIPK1Q86Z02 1210 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 HDHD5Q9BXW7 423 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 ACTR6Q9GZN1 396 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 MRPL46Q9H2W6 279 aaKnown RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 HHATLQ9HCP6 504 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 Q9N2J8 555 aa15.71■□□□□ 0.11
TMEM53-209ENST00000495630 CHD3Q12873 2000 aaKnown RBP15.71■□□□□ 0.11
TMEM53-209ENST00000495630 EIF1AYO14602 144 aaKnown RBP15.7■□□□□ 0.1
TMEM53-209ENST00000495630 PRR5P85299 388 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 ACSM2AQ08AH3 577 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 C2orf54Q08AI8 447 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 RASA2Q15283 850 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 LGSNQ5TDP6 509 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 ACSM2BQ68CK6 577 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 GTF2IRD2BQ6EKJ0 949 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 GALNT18Q6P9A2 607 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 GTF2IRD2Q86UP8 949 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 EXOC3L1Q86VI1 746 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 WDR75Q8IWA0 830 aaKnown RBP15.7■□□□□ 0.1
TMEM53-209ENST00000495630 TMEM151AQ8N4L1 468 aa15.7■□□□□ 0.1
TMEM53-209ENST00000495630 CDYL2Q8N8U2 506 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms