RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ACP2P11117 423 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 GSTM3P21266 225 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 TTKP33981 857 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 DAPP51397 102 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 UGT2B15P54855 530 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SH3BGRP55822 239 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 DCAF7P61962 342 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 GABREP78334 506 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 MYBPC1Q00872 1141 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 OCA2Q04671 838 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ST3GAL3Q11203 375 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 COX10Q12887 443 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF267Q14586 743 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 EXOC3L2Q2M3D2 409 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 DCST2Q5T1A1 773 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 DCAF12Q5T6F0 453 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ARHGAP40Q5TG30 622 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 AP1ARQ63HQ0 302 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 B3GNT8Q7Z7M8 397 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF605Q86T29 641 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 TMEM52Q8NDY8 209 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 OR52R1Q8NGF1 315 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 OR1L3Q8NH93 324 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 VANGL1Q8TAA9 524 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 HDAC2Q92769 488 aaKnown RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 DAZLQ92904 295 aaKnown RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SLC38A4Q969I6 547 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF501Q96CX3 271 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 PRRC1Q96M27 445 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 MUS81Q96NY9 551 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SDF2Q99470 211 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 LMF2Q9BU23 707 aaKnown RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 RIBC2Q9H4K1 309 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 CCDC86Q9H6F5 360 aaKnown RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ACER3Q9NUN7 267 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 C14orf105Q9NVL8 296 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ACAD8Q9UKU7 415 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SCN2AQ99250 2005 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 USP24Q9UPU5 2620 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 CACNA1BQ00975 2339 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 A0A1W2PRQ8 180 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 A0A1W2PS29 197 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 MED19A0JLT2 244 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 CDRT15L2A8MXV6 281 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 POLR1CO15160 346 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 MRPS14O60783 128 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ADAP00813 363 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 CYC1P08574 325 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FGF5P12034 268 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FOLR1P15328 257 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 EEF1B2P24534 225 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 LCN1P31025 176 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 GABRA3P34903 492 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TRHRP34981 398 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 YAP1P46937 504 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 RGS8P57771 180 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TAS2R41P59536 307 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 GABARAPL2P60520 117 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 IL5RAQ01344 420 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 CHRNEQ04844 493 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FUT7Q11130 342 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 PPP1R8Q12972 351 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 DGCR6Q14129 220 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 KCNAB1Q14722 419 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TRAM2Q15035 370 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 GPR68Q15743 365 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 MAPK11Q15759 364 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 DUSP5Q16690 384 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TBC1D25Q3MII6 688 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 C3orf38Q5JPI3 329 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FGD3Q5JSP0 725 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF691Q5VV52 312 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 RHBDD2Q6NTF9 364 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FRRS1Q6ZNA5 592 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TMPRSS9Q7Z410 1059 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 PPP1R3BQ86XI6 285 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TMEM151BQ8IW70 566 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 HS3ST5Q8IZT8 346 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 PARP8Q8N3A8 854 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 GPR32P1Q8NGA4 272 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 OR4C15Q8NGM1 316 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 OR52J3Q8NH60 311 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 OR14A16Q8NHC5 309 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 APOBEC4Q8WW27 367 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 HOXB13Q92826 284 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 SLC35B4Q969S0 331 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FBXL20Q96IG2 436 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 DHRS1Q96LJ7 313 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FEVQ99581 238 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ARHGDIGQ99819 225 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 CNPPD1Q9BV87 410 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TEX12Q9BXU0 123 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 GABARAPL3Q9BY60 117 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 GRIP2Q9C0E4 1043 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF350Q9GZX5 532 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 HOXD1Q9GZZ0 328 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 OR10A5Q9H207 317 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ADNPQ9H2P0 1102 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms