RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 EP300Q09472 2414 aaPredicted RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 IGHA2P01877 340 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 CD3GP09693 182 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 ITPKBP27987 946 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 TRHRP34981 398 aaPredicted RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 IFNGR2P38484 337 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 SRP9P49458 86 aaKnown RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 ZNF438Q7Z4V0 828 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 OR13C2Q8NGS9 318 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 HRASLS2Q9NWW9 162 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 SEC14L4Q9UDX3 406 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 MAPRE3Q9UPY8 281 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 LRIT2A6NDA9 550 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 FBXO45P0C2W1 286 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 OPRD1P41143 372 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 KCNJ5P48544 419 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 CDKL4Q5MAI5 379 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 ATAD3CQ5T2N8 411 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 AMIGO1Q86WK6 493 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 LINC00471Q8N535 108 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 EIF3FO00303 357 aaPredicted RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 MPZL2O60487 215 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 KLF8O95600 359 aaPredicted RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 SNRPNP63162 240 aaKnown RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 ST3GAL3Q11203 375 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 SHISA6Q6ZSJ9 500 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 OR8H1Q8NGG4 311 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 COQ10AQ96MF6 247 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 DCLRE1CQ96SD1 692 aaKnown RBP12.61□□□□□ -0.39
GPC1-209ENST00000495100 SGPP1Q9BX95 441 aa12.61□□□□□ -0.39
GPC1-209ENST00000495100 CARNS1A5YM72 827 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 ZAR1LA6NP61 321 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SSNA1O43805 119 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SDC3O75056 442 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 PPP1R3DO95685 299 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SHC1P29353 583 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 OR10A3P58181 314 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 ZNF181Q2M3W8 571 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 AGAP7PQ5VUJ5 663 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 PARM1Q6UWI2 310 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 ANKRD33Q7Z3H0 272 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 CEACAM19Q7Z692 300 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 OOSP2Q86WS3 158 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 PRR22Q8IZ63 422 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SNX33Q8WV41 574 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 NEURL3Q96EH8 262 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 VMP1Q96GC9 406 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 MICU1Q9BPX6 476 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SLC25A18Q9H1K4 315 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 THSD1Q9NS62 852 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 ATXN7L1Q9ULK2 861 aaPredicted RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 ACADLP28330 430 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 PPP1CAP62136 330 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 PPP2CBP62714 309 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 PPP2CAP67775 309 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 FABP5Q01469 135 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 ZNF267Q14586 743 aaPredicted RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 MLF2Q15773 248 aaPredicted RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 BCL2L15Q5TBC7 163 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 LCN1P1Q5VSP4 162 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 OR2A1Q8NGT9 310 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 C9orf43Q8TAL5 461 aaPredicted RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 THAP3Q8WTV1 239 aaPredicted RBP12.6□□□□□ -0.39
GPC1-209ENST00000495100 TM9SF4Q92544 642 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 TMCO6Q96DC7 493 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 SLC41A3Q96GZ6 507 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 FRMD6Q96NE9 622 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
GPC1-209ENST00000495100 C4orf51C9J302 202 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 PROM1O43490 865 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 LALBAP00709 142 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 PTHLHP12272 177 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 AHCYP23526 432 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 ATP5A1P25705 553 aaKnown RBP12.59□□□□□ -0.39
GPC1-209ENST00000495100 ACSL1P33121 698 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 ATP12AP54707 1039 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 EPHA5P54756 1037 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 WNT4P56705 351 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 TRAM2Q15035 370 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 AMZ1Q400G9 498 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 SFRP4Q6FHJ7 346 aaPredicted RBP12.59□□□□□ -0.39
GPC1-209ENST00000495100 METAP1DQ6UB28 335 aaPredicted RBP12.59□□□□□ -0.39
GPC1-209ENST00000495100 MSANTD1Q6ZTZ1 278 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 CXXC5Q7LFL8 322 aaKnown RBP12.59□□□□□ -0.39
GPC1-209ENST00000495100 OR4C6Q8NH72 309 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 TPSD1Q9BZJ3 242 aa12.59□□□□□ -0.39
GPC1-209ENST00000495100 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms