RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HPNP05981 417 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 GP1BBP13224 206 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 HPGDP15428 266 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 MATN1P21941 496 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 GCKP35557 465 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 SMSP52788 366 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 DGKQP52824 942 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 AQP5P55064 265 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 STX5Q13190 355 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 PDCD4Q53EL6 469 aaKnown RBP14.54□□□□□ -0.08
LIME1-209ENST00000494776 OR5M10Q6IEU7 315 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 ZNF585AQ6P3V2 769 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 C6orf120Q7Z4R8 191 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 WDSUB1Q8N9V3 476 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 GLB1L3Q8NCI6 653 aaPredicted RBP14.54□□□□□ -0.08
LIME1-209ENST00000494776 OR4K17Q8NGC6 315 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 HOXB13Q92826 284 aaPredicted RBP14.54□□□□□ -0.08
LIME1-209ENST00000494776 CDS1Q92903 461 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 PSMG3-AS1Q96PY0 264 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 G6PC3Q9BUM1 346 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 BTBD2Q9BX70 525 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 UBQLN3Q9H347 655 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 PIGUQ9H490 435 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 TCF7L2Q9NQB0 619 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 DUSP22Q9NRW4 184 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 GIN1Q9NXP7 522 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 FLRT3Q9NZU0 649 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 NINQ8N4C6 2090 aa14.54□□□□□ -0.08
LIME1-209ENST00000494776 COL12A1Q99715 3063 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 POLEQ07864 2286 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 FIGNL2A6NMB9 653 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 E9PLN8 166 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 FADS1O60427 444 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 IGKV1D-16P01601 117 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 PGRP06401 933 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 ATP6V1C1P21283 382 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 UQCRC2P22695 453 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 IL12AP29459 219 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 CHI3L1P36222 383 aaPredicted RBP14.53□□□□□ -0.08
LIME1-209ENST00000494776 IDH3AP50213 366 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 STX1BP61266 288 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 PHC1P78364 1004 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 GRAMD1BQ3KR37 738 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 EIPR1Q53HC9 387 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 WIPI1Q5MNZ9 446 aaPredicted RBP14.53□□□□□ -0.08
LIME1-209ENST00000494776 CCNJQ5T5M9 372 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 RPTNQ6XPR3 784 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 YRDCQ86U90 279 aaKnown RBP14.53□□□□□ -0.08
LIME1-209ENST00000494776 MARCH3Q86UD3 253 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 CLEC4FQ8N1N0 589 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 MIER2Q8N344 545 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 ARFGAP2Q8N6H7 521 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 FAM83FQ8NEG4 500 aaPredicted RBP14.53□□□□□ -0.08
LIME1-209ENST00000494776 OR14L1PQ8NHC6 308 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 NTNG2Q96CW9 530 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 SLC35G5Q96KT7 338 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 PANX1Q96RD7 426 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 VKORC1Q9BQB6 163 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 PNPLA3Q9NST1 481 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 GPATCH2Q9NW75 528 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 ZIM2Q9NZV7 527 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 SPRR3Q9UBC9 169 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 BTNL2Q9UIR0 455 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 DKKL1Q9UK85 242 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 SLC6A5Q9Y345 797 aa14.53□□□□□ -0.08
LIME1-209ENST00000494776 SPTBN1Q01082 2364 aaKnown RBP14.52□□□□□ -0.08
LIME1-209ENST00000494776 DUXAA6NLW8 204 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 SCN2BO60939 215 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 IL6P05231 212 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 GAS1P54826 345 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 RPS26P62854 115 aaKnown RBP14.52□□□□□ -0.09
LIME1-209ENST00000494776 LRRC74AQ0VAA2 488 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIME1-209ENST00000494776 TMEM211Q6ICI0 200 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 MRGPRGQ86SM5 289 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 TRIML2Q8N7C3 387 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 OR5D16Q8NGK9 328 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 FAM110BQ8TC76 370 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 DUSP19Q8WTR2 217 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 OR7D2Q96RA2 312 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 CCDC28BQ9BUN5 200 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 DSN1Q9H410 356 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 FBXL2Q9UKC9 423 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 NAV2Q8IVL1 2488 aa14.52□□□□□ -0.09
LIME1-209ENST00000494776 MAST4O15021 2626 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 SCDO00767 359 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 ANGPTL1O95841 491 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 ENDOUP21128 410 aaKnown RBP14.51□□□□□ -0.09
LIME1-209ENST00000494776 ACVR2AP27037 513 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 LCN1P31025 176 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 SRD5A2P31213 254 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 CASP9P55211 416 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 EMC4Q5J8M3 183 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 EXOSC6Q5RKV6 272 aaKnown RBP14.51□□□□□ -0.09
LIME1-209ENST00000494776 DCST2Q5T1A1 773 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 ZNF621Q6ZSS3 439 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 NCCRP1Q6ZVX7 275 aaPredicted RBP14.51□□□□□ -0.09
LIME1-209ENST00000494776 RNF138Q8WVD3 245 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 THOC1Q96FV9 657 aaKnown RBP14.51□□□□□ -0.09
LIME1-209ENST00000494776 CCDC115Q96NT0 180 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms