RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 HNRNPRO43390 633 aaKnown RBP20.58■□□□□ 0.89
SNIP1-203ENST00000493916 SCO2O43819 266 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 UTS2O95399 124 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 HMGN2P05204 90 aaKnown RBP20.58■□□□□ 0.89
SNIP1-203ENST00000493916 ALOX5P09917 674 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 CLK3P49761 638 aaKnown RBP20.58■□□□□ 0.89
SNIP1-203ENST00000493916 OCRLQ01968 901 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 DUSP5Q16690 384 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNIP1-203ENST00000493916 FADS6Q8N9I5 356 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 OR8J2Q8NGG1 315 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 OR14L1PQ8NHC6 308 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 FBXO30Q8TB52 745 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 FAM110BQ8TC76 370 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 ABTB1Q969K4 478 aaPredicted RBP20.58■□□□□ 0.89
SNIP1-203ENST00000493916 ARL8AQ96BM9 186 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 C16orf58Q96GQ5 468 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 STACQ99469 402 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 DPY30Q9C005 99 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 SDHAF3Q9NRP4 125 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 DUSP22Q9NRW4 184 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 TAS2R10Q9NYW0 307 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 ADGRG4Q8IZF6 3080 aa20.58■□□□□ 0.88
SNIP1-203ENST00000493916 TRPC5OSA6NMA1 111 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 SLCO1B7G3V0H7 640 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 ANKRD28O15084 1053 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 KCNK2O95069 426 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 NGFRP08138 427 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 LCN1P31025 176 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 RFX3P48380 749 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 CCT3P49368 545 aaKnown RBP20.57■□□□□ 0.88
SNIP1-203ENST00000493916 GFRA1P56159 465 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 PGS1Q32NB8 556 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 ACSF3Q4G176 576 aaPredicted RBP20.57■□□□□ 0.88
SNIP1-203ENST00000493916 DCST1Q5T197 706 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 OR5M10Q6IEU7 315 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 OR4K17Q8NGC6 315 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 LILRB4Q8NHJ6 448 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 TESCQ96BS2 214 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 ALKBH4Q9NXW9 302 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 DKKL1Q9UK85 242 aa20.57■□□□□ 0.88
SNIP1-203ENST00000493916 PCNX1Q96RV3 2341 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 C17orf51A8MQB3 221 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 RNASET2O00584 256 aaKnown RBP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 KRT16P08779 473 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 DSCR4P56555 118 aaPredicted RBP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 WNT3P56703 355 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 HBA1P69905 142 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 LASP1Q14847 261 aaKnown RBP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 SF3B4Q15427 424 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 GRAMD1BQ3KR37 738 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 SPDYE7PQ495Y7 208 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 RIPPLY2Q5TAB7 128 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 CDC73Q6P1J9 531 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 IFNEQ86WN2 208 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 CCDC71Q8IV32 467 aaPredicted RBP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 COX18Q8N8Q8 333 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 OR2M3Q8NG83 312 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 JADE3Q92613 823 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 MARVELD3Q96A59 401 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 WDYHV1Q96HA8 205 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 ATP6V1G3Q96LB4 118 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 YIPF4Q9BSR8 244 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 BTBD2Q9BX70 525 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 ACTRT3Q9BYD9 372 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 TBL1XR1Q9BZK7 514 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 RTN4RQ9BZR6 473 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 PIGUQ9H490 435 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 GPATCH2Q9NW75 528 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 ARGLU1Q9NWB6 273 aaPredicted RBP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 MARCOQ9UEW3 520 aaPredicted RBP20.56■□□□□ 0.88
SNIP1-203ENST00000493916 CAMK2AQ9UQM7 478 aa20.56■□□□□ 0.88
SNIP1-203ENST00000493916 IGLV3-32A0A0A0MS00 114 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 A0A0G2JNJ9 132 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 C19orf84I3L1E1 186 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 CFLARO15519 480 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 SOX30O94993 753 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 DPP4P27487 766 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 ADH7P40394 386 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 KIR3DL1P43629 444 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 CLNS1AP54105 237 aaKnown RBP20.55■□□□□ 0.88
SNIP1-203ENST00000493916 TP53BP2Q13625 1128 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 GANABQ14697 944 aaKnown RBP20.55■□□□□ 0.88
SNIP1-203ENST00000493916 DPY19L1Q2PZI1 675 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 OR4F3Q6IEY1 312 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 BHLHB9Q6PI77 547 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 SPATA19Q7Z5L4 167 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 LACC1Q8IV20 430 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 WDR75Q8IWA0 830 aaKnown RBP20.55■□□□□ 0.88
SNIP1-203ENST00000493916 OR10Q1Q8NGQ4 319 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 G6PC3Q9BUM1 346 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 HHATLQ9HCP6 504 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 AIG1Q9NVV5 245 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 Q9UFV3 132 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 ITPR2Q14571 2701 aa20.55■□□□□ 0.88
SNIP1-203ENST00000493916 NAV2Q8IVL1 2488 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ZIC3O60481 467 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 EPPINO95925 133 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ALDOCP09972 364 aaKnown RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 CPN1P15169 458 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms