RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CLCA3PQ9Y6N3 262 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 GTF3C1Q12789 2109 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 NF1P21359 2839 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 FAM221AA4D161 298 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 EMC8O43402 210 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ZG16O60844 167 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 UQCRC2P22695 453 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 PRKAG1P54619 331 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 MRPS35P82673 323 aaKnown RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 GAB1Q13480 694 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 TP53BP2Q13625 1128 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF267Q14586 743 aaPredicted RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 DNAL1Q4LDG9 190 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 SFT2D3Q587I9 215 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF628Q5EBL2 1059 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF324BQ6AW86 544 aaPredicted RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 BHLHB9Q6PI77 547 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 HACD2Q6Y1H2 254 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 RINLQ6ZS11 566 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ANKRD37Q7Z713 158 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 MCEMP1Q8IX19 187 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 SIRT6Q8N6T7 355 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 CATSPER1Q8NEC5 780 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 OR56A1Q8NGH5 318 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 OR14A16Q8NHC5 309 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 NR4A3Q92570 626 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 DAZLQ92904 295 aaKnown RBP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 MOAP1Q96BY2 351 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 LRRC58Q96CX6 371 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 ART5Q96L15 291 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 CGREF1Q99674 301 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 SLC35A5Q9BS91 424 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.22□□□□□ -0.61
UPF3A-210ENST00000493727 SLAMF8Q9P0V8 285 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 BCAP29Q9UHQ4 241 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 L3MBTL1Q9Y468 752 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 PCDHB14Q9Y5E9 798 aa11.22□□□□□ -0.61
UPF3A-210ENST00000493727 C15orf38-AP3S2A0A0A6YYH1 394 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 IGHV3-20A0A0C4DH32 117 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 EVPLLA8MZ36 301 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 GYG2O15488 501 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 COQ9O75208 318 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 KRT75O95678 551 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 NPPAP01160 153 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PPIBP23284 216 aaKnown RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 GALNSP34059 522 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 CCT3P49368 545 aaKnown RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 EFNA3P52797 238 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PSME3P61289 254 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 SLC25A3Q00325 362 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PCOLCEQ15113 449 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PRICKLE4Q2TBC4 344 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 LRIF1Q5T3J3 769 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PAPD4Q6PIY7 484 aaKnown RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 FAM111BQ6SJ93 734 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 DLEU7Q6UYE1 221 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 TMEM64Q6YI46 380 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 ARPINQ7Z6K5 226 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 DEFB107AQ8IZN7 70 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PGAM4Q8N0Y7 254 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 CLEC4FQ8N1N0 589 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 NUP43Q8NFH3 380 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 GOT1L1Q8NHS2 421 aaPredicted RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 PNPT1Q8TCS8 783 aaKnown RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 SFXN5Q8TD22 340 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 ELP4Q96EB1 424 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 AURKBQ96GD4 344 aaPredicted RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 SLC35G5Q96KT7 338 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 IMMP1LQ96LU5 166 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 LPAR4Q99677 370 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 SH3GL1Q99961 368 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 HOPXQ9BPY8 73 aaPredicted RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 MESP1Q9BRJ9 268 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 OR8D2Q9GZM6 311 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 RAD21L1Q9H4I0 556 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 EQTNQ9NQ60 294 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 SIRT3Q9NTG7 399 aaPredicted RBP11.21□□□□□ -0.61
UPF3A-210ENST00000493727 MAT2BQ9NZL9 334 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 VAPAQ9P0L0 249 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 ABI3Q9P2A4 366 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 COPS7AQ9UBW8 275 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 ERVK-19Q9WJR5 959 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 CLDN16Q9Y5I7 305 aa11.21□□□□□ -0.61
UPF3A-210ENST00000493727 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 OR5H15A6NDH6 313 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SAGE2PA6NJ88 616 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 PLOD2O00469 737 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 BCAS2O75934 225 aaPredicted RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SEC24DO94855 1032 aaPredicted RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 RASAL1O95294 804 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 WDPCPO95876 746 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 CT62P0C5K7 136 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms