RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CASP9P55211 416 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 ALDH6A1Q02252 535 aaKnown RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 GTF3C1Q12789 2109 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 GTDC1Q4AE62 458 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 TBCELQ5QJ74 424 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 SAXO2Q658L1 398 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 TNFAIP8L2Q6P589 184 aaPredicted RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 FIGNL1Q6PIW4 674 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 GALNT10Q86SR1 603 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 FJX1Q86VR8 437 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 POGLUT1Q8NBL1 392 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 PNPT1Q8TCS8 783 aaKnown RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 HOXB13Q92826 284 aaPredicted RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 TMCO6Q96DC7 493 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 NEURL3Q96EH8 262 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 ZNF597Q96LX8 424 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 JSRP1Q96MG2 331 aaPredicted RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 OR7D2Q96RA2 312 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 NODALQ96S42 347 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 SECISBP2Q96T21 854 aaKnown RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 STACQ99469 402 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 SLX1AQ9BQ83 275 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 DOHHQ9BU89 302 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 BTBD2Q9BX70 525 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 OSBPL11Q9BXB4 747 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 TSPAN10Q9H1Z9 355 aaPredicted RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 OR51I1Q9H343 314 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 PIGUQ9H490 435 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 SERHL2Q9H4I8 314 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 MRGBPQ9NV56 204 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 TMEM45AQ9NWC5 275 aa10.62□□□□□ -0.71
CTSA-209ENST00000493522 TUBA8Q9NY65 449 aaPredicted RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 BOKQ9UMX3 212 aaPredicted RBP10.62□□□□□ -0.71
CTSA-209ENST00000493522 POLQO75417 2590 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 FAM166BA8MTA8 275 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 SCO2O43819 266 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 ICOSLGO75144 302 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 KRT75O95678 551 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 IL33O95760 270 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 PRF1P14222 555 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 CNR1P21554 472 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 MAP3K8P41279 467 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 TRPC1P48995 793 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 EXOSC6Q5RKV6 272 aaKnown RBP10.61□□□□□ -0.71
CTSA-209ENST00000493522 DCST2Q5T1A1 773 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 CCNJQ5T5M9 372 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 SP5Q6BEB4 398 aaPredicted RBP10.61□□□□□ -0.71
CTSA-209ENST00000493522 C16orf62Q7Z3J2 963 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 RNF130Q86XS8 419 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 MCEMP1Q8IX19 187 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 DNAJB8Q8NHS0 232 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 NR4A3Q92570 626 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 TTTY12Q9BZ98 90 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 DUSP22Q9NRW4 184 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 SLC6A13Q9NSD5 602 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 FLRT3Q9NZU0 649 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 CAPN7Q9Y6W3 813 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.61□□□□□ -0.71
CTSA-209ENST00000493522 ZFHX3Q15911 3703 aa10.61□□□□□ -0.71
CTSA-209ENST00000493522 A0A096LPI6 279 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 A0A1W2PP18 115 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 KCNK2O95069 426 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 IGKV1D-16P01601 117 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 C1QCP02747 245 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 OR12D1P0DN82 309 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 CD1EP15812 388 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 ATP6V1C1P21283 382 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 EVI2BP34910 448 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 CASP3P42574 277 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 MAN2A2P49641 1150 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 ANXA11P50995 505 aaKnown RBP10.6□□□□□ -0.71
CTSA-209ENST00000493522 KLF10Q13118 480 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 MAPRE2Q15555 327 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 GRAMD1BQ3KR37 738 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 ATAD3BQ5T9A4 648 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 SLC30A6Q6NXT4 461 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 ZFP62Q8NB50 900 aaPredicted RBP10.6□□□□□ -0.71
CTSA-209ENST00000493522 ZFP90Q8TF47 636 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 GTF2H4Q92759 462 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 RAB8BQ92930 207 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 AURKBQ96GD4 344 aaPredicted RBP10.6□□□□□ -0.71
CTSA-209ENST00000493522 G6PC3Q9BUM1 346 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 ANGPTL4Q9BY76 406 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 NMUR2Q9GZQ4 415 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 PAIP1Q9H074 479 aaKnown RBP10.6□□□□□ -0.71
CTSA-209ENST00000493522 IL1RL2Q9HB29 575 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 GALNT9Q9HCQ5 603 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 EXD2Q9NVH0 621 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 GIN1Q9NXP7 522 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 FAM53CQ9NYF3 392 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 B4GALT7Q9UBV7 327 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.6□□□□□ -0.71
CTSA-209ENST00000493522 LEF1Q9UJU2 399 aaPredicted RBP10.6□□□□□ -0.71
CTSA-209ENST00000493522 ABCG2Q9UNQ0 655 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 NDUFAF1Q9Y375 327 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 PCDHGB3Q9Y5G1 929 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 KCNE3Q9Y6H6 103 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms